| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6979 |
|---|
| Symbol | |
|---|
| ID | 8338345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8075687 |
|---|
| End bp | 8077117 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960059 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117650 |
|---|
| Protein GI | 256396086 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.960065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAAGCA ATCCATCGCG TCGTATCGGC GCCGCCGCGG CCACCGCCGC GCTGCTCGCC
CTGCCCGCCA CCGCCCTCGG CGGGCCGGCG TACGCCGCCG CCTCCGCGAC CCCCGCAGCG
ACCAGCCTGG TCCAGGTCAG CAGCGACCCC TACACCGACA GCCAGGCCCA GCACGCCACC
GAAGTCGAAC CGGACACCTT CTCCTTCGGC AGCACCGTCG TCTCGGCGTT CCAGGTCGGC
CGGGTCTTCG GCGGCGGCGC CTCGAACATC GGCTGGTCCG AATCCACCGA CGGCGGCACC
ACCTGGACCC ACGGCTTCCT GCCCGACACC ACCGCCAACA CCGGCGGTCC CTACGGCCAG
GTCAGCGACG CCTCGGTCGC CTACGACGCC AAGCACGGCC AATGGCTGAT CTCCTACCTC
GGGATCCTGC CCTCCGGCAA CGTCAACGTC GCCGTCAGCC GCTCCCCCGA CGGCCACACC
TGGGGCAACC CGGTGACCGT GTCCAGCGCC ACGTTCGACG ACAAGAACTG GACCGTCTGC
GACAACCACA CCGCCAGCAC CTTCTACGGG CACTGCTACA CCGAGTACGA CGACGCCAAC
GCCGGCGACG CCGAGCACAT GCGCACCTCC ACCGACGGTG GCCTGACCTG GGGCACGCAG
AAGAGTCCAT CGGGCAACCC GAGCGGACTC GGCGGCCAGC CGGTCGTGCA GCCCAACGGA
ACCGTCGTGG TCCCCTACTC GGCCAGCACC TCCGAGCGCG CCTTCACCTC CACCAACGGC
GGCACCAGCT GGACCGCGAG CGTCCGCATC GCCACCGTCA GCCACCACAC CGTCGCAGGC
CTGGAATCAG ACTCCATCGC CCCGCAGGAC GAACTGCGCG AGAGCCCGCT GCCCTCGGCC
GAGATCGACG CCGCCGGCAA GGTCTACGTC ACCTGGTCCG ACTGCCGCTT CCGCTCCGGC
TGCCCCAGCA ACGACATCAT CATGTCGACC TCGACCAACG GCACCACCTG GAGCACCCCG
ACCCGGGTGC CGATCGACGC GACCAACAGC ACCGTCGACC ACTTCACGCC GGGCATCGGC
GTCGACCCCT CCAGCTCGGG AAGCACCGCG CGCATCGGCC TGGCGTACTA CTACTACCCG
GTCGCCAACT GCACCGACAC CACCTGCAAG CTCGACGTCG GCTACGTCTC CTCGACCAAC
GGCGGCGCCA CCTGGAGCAC CCCGACCCAG CTCGCTGGCC CGATGACCCT GGCGTGGCTG
CCCAACACCT CGCAGGGACG CATGTTCGGC GACTACATCT CCACCTCCGT CTTCGCCGGC
GGCAATGCCT TGCCGGTCAT CGCGGTGGCC TCCGCACCAA GCGGCTCGAC ATTCACCATG
GGCATGTTCG CCCCAACCGG CGGACTCACC ATCGGCGGCG CCGCTAAGTA A
|
|---|
| Protein sequence | MRSNPSRRIG AAAATAALLA LPATALGGPA YAAASATPAA TSLVQVSSDP YTDSQAQHAT
EVEPDTFSFG STVVSAFQVG RVFGGGASNI GWSESTDGGT TWTHGFLPDT TANTGGPYGQ
VSDASVAYDA KHGQWLISYL GILPSGNVNV AVSRSPDGHT WGNPVTVSSA TFDDKNWTVC
DNHTASTFYG HCYTEYDDAN AGDAEHMRTS TDGGLTWGTQ KSPSGNPSGL GGQPVVQPNG
TVVVPYSAST SERAFTSTNG GTSWTASVRI ATVSHHTVAG LESDSIAPQD ELRESPLPSA
EIDAAGKVYV TWSDCRFRSG CPSNDIIMST STNGTTWSTP TRVPIDATNS TVDHFTPGIG
VDPSSSGSTA RIGLAYYYYP VANCTDTTCK LDVGYVSSTN GGATWSTPTQ LAGPMTLAWL
PNTSQGRMFG DYISTSVFAG GNALPVIAVA SAPSGSTFTM GMFAPTGGLT IGGAAK
|
|---|
| |