| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6968 |
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| Symbol | |
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| ID | 8338334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8057888 |
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| End bp | 8059573 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960048 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003117639 |
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| Protein GI | 256396075 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.144872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG CTCGCCCATG GTGGCGTGAC GCCGTCGTCT ACCAGGTCTA CGTGAAGTCC
TTCGCCGACG GCGACGGAGA CGGCACCGGC GATCTGGACG GCCTGGCCTC GCGGCTGGAC
CATCTGGAGC GCCTCGGCGT GGACGCGCTG TGGCTGAGCC CCTGCTATCC CTCGCCCGGA
CGGGACGGCG GCTACGACAT CGCCGACTAC TTCAGCATCG ACCCGCTCTA CGGCGGAACG
GCAGCGCTGG ACCGGCTGGT CAAAGCCGCG CACGACCGCA GTCTCAAGGT CTTGCTCGAC
ATCGTCCCCA ACCACTGCTC GGCCGAACAC CCCTGGTTCC AGCAAGCACT GAACAGCCCT
GCCGGCTCAT CGCAGCGCGC CCTGTTCCAC TTCCACGACG GTCAAGGCGC CGACGGCGAA
CTGCCGCCCA ACAACTGGCA ATCCGTGTTC GGCGGCTCGG CCTGGACCCG GACCACGGAC
CCCGACGGCA GCCCCGGCCA GTGGTACCTG CACCTGTTCG ACTCCTGGCA GCCCGACCTG
AACTGGGATC GACCCGAGGT CCGCGCACAC TTTCAGGACA TGCTGCGCCA CTGGTTCGAC
AAGGGCGTCG ACGGCTTCCG CATCGATGTG GCCGCCATGC TGGTCAAGGC CGACGGACTT
CCCGACCGTC CGGATAACGG CTTCCGCCCT GGAGGCTCGG ACCCCGCCAG CAACCAGCCC
GCCGTCCACG ACATCTACCG CAGCTGGCGT GCCGTGACCG AGGAATACGC CGACAGAGAC
CTGATGCTCG TCGGCGAAAT CTGGGCACCC ACCGCTGAAC ACGTCACCGC CTTCATCCGG
CCCGGGGAGC TGCACGAGGC GTTCTACTTC GACCTGATGA CCCAGAACTG GGACGCCGCC
GCCTTCCGCG CCAGCGTTCA AAGAGCACTG CAGGCGATGG CCGCGACGGC ACCCGTCCCG
GACCAGGCCG GCGTCCTGGC CTGGGTGCTC AACAGCCACG ACGCGCACCG CGCGGTCTCC
CGCTACGGCC TGACCACCGC TGAACCCCTC GAGTCACCCG ACGCCATGGC GCGTCTGCTC
CGCCGCCGCG GCCCGGTCGA CGTAGCCGTC GGCCAGGCTC GAGCTCGCGC GGCGCTGCTG
TTCCAGCTCG CACTTCCCGG CGCCGCGTTC CTCTATCAGG GGGAGGAGCT CGGTCTGCCG
GAGGTCATGG ACATCCCCGA CGAAGCCCGC CAGGACCCCA TCTGGACCCG GTCGGCCGGC
CGTGAACACG GTCGCGACGG CTGCCGTGTC CCGTTGCCCT GGAACGCGAG CGCTCCGAGC
TTCGGCTTCA GCCCTGCGAA CGCTGCCGGA AAGCCCTGGC TGCCGCAGCC GCTGTGGTTC
GCCGACTACG CGCAGGACCG GCAAAGTACC GACCCGCACT CGACTCTGAA CTTCTATCGC
AGCGCCCTGA CAGCGCGCCG AGCCCTGTTC GCGGGCGCCC CCGACCAGAT CACCTGGGCC
GATCACGAGC AGCCTCGCCC GGACGTGCTC ATCTTCACGC GTGGGACGCT GACCGTGGTC
ACCGTCTTCG GTGACGCGCC GTTTCACCTG TCGGAGGAGC TCGGCCATGT GACGCTGGCC
AGCACCACGA TCAGCAACCG GGTACTGCCC GGCTCCAGCA CCGCCTGGCT CATCCGCAAT
TCTTAA
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| Protein sequence | MSTARPWWRD AVVYQVYVKS FADGDGDGTG DLDGLASRLD HLERLGVDAL WLSPCYPSPG
RDGGYDIADY FSIDPLYGGT AALDRLVKAA HDRSLKVLLD IVPNHCSAEH PWFQQALNSP
AGSSQRALFH FHDGQGADGE LPPNNWQSVF GGSAWTRTTD PDGSPGQWYL HLFDSWQPDL
NWDRPEVRAH FQDMLRHWFD KGVDGFRIDV AAMLVKADGL PDRPDNGFRP GGSDPASNQP
AVHDIYRSWR AVTEEYADRD LMLVGEIWAP TAEHVTAFIR PGELHEAFYF DLMTQNWDAA
AFRASVQRAL QAMAATAPVP DQAGVLAWVL NSHDAHRAVS RYGLTTAEPL ESPDAMARLL
RRRGPVDVAV GQARARAALL FQLALPGAAF LYQGEELGLP EVMDIPDEAR QDPIWTRSAG
REHGRDGCRV PLPWNASAPS FGFSPANAAG KPWLPQPLWF ADYAQDRQST DPHSTLNFYR
SALTARRALF AGAPDQITWA DHEQPRPDVL IFTRGTLTVV TVFGDAPFHL SEELGHVTLA
STTISNRVLP GSSTAWLIRN S
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