| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6943 |
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| Symbol | |
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| ID | 8338309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8015052 |
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| End bp | 8017970 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960024 |
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| Product | ABC transporter related |
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| Protein accession | YP_003117615 |
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| Protein GI | 256396051 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.144831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCACT GGCGTCTCCG CAGCCGCGCG ACTCGGCCGT ACACGCCGGT CGGAGCGGTC
TACTACGGTC CGTTCGCCCG TTTCGCCGAC TGGTACCACG GTCGGCGGGA CGGGCGGGCG
CCGCTCCCGG ATCCGGAACT GGTGGAGCGG TCGACCCCGA CCCGGGACTA CCTCGCCGAG
CGGACCCGTG ACGCGTACGA GCACGAATAC CTGTGGTACG AGCGCGACCG GGCACGCGTG
GCCGAGGAGT TGGCCTCGAC CTCCATCAGG ATCCGGCAGA CTCGCGAGCG GGTCACGACC
GTACGGGCCG AGCAGCAGCG GAATGTGCTG GAGGATGCCG GCCGGCTCGG CCGGCGCGCC
GGCGAGTGGG TGACGGACCC GCGGGTCGTC AAGGGCCGGC GGCGGGCCGA GCAGGCGTGG
CGGAACCGGC AGGCCCAGGC GGCGATAGCG GCCGTGGTCG CTGAGGCCGA GGCGTTGGAG
GCGCACCGCG CCCGGCTCGA GGACGATCTC GCGCGGCGCG CGGCGGTGGC CCGGGCCCGC
GTGACCCGGT TGCGAGAACA CTGCTCGCAG CGACTGTCCG CCTACCGCCG CACGCTGCTG
CGATACCACC CGGAAACAGG CTGGGCGAGT GTAGTCATCG ACGCTGTGCC GCCGGATCTG
CCCGGCTGGC TCCCGCCGGC ATCGCCGGCG CCGAGCCGTG CCGTCCGGAG GCCGGTGGCC
GGTGCGAGAA CGGCTTCGCG GCGACCGGGC GCTCTGCGCG ACGTGGCGGT CATGGATCTC
GCGGCGCTGC CGGGAAGCGC ACTGACCTTC GGTTCGGCGG CGTCGGGCCC CGGCCTGCTC
GCGGACCCGG CCGTCCCCGG ACGCTTCTTC GCCCTTCACT GGCAGGGCGA CGCCGGCTAC
GTGCTGCACG TGCTGGAGAA GGCCGACATC GGTCCGTACG TGGAGGGGCG CGCGGTCACC
TCCCGCACGC TGCCGTTGCG GCCCGGCGCC ACGATCGGCC TGGCCGGCAC CAGCCTGCAG
CTGCTGCCCG ACGGGCGCGT GGAGCGCGTC ACCGACAAGG GGCGCCTGGT CGTCGGCGAC
CTGAACCATG TGCGCCGTGA CGGCAAGAGC CTGCTCACGA ACGTCTCCTT CGCTCAACCG
GGCGGGACGG TCACCGCTGT CATCGGTCCC TCCGGCGCGG GCAAGACTTC GTTGTTCAGC
GCGATTCTCG GCGAGCTCGG CGAGACGGCC AAGGGATCCA TCGTCTTCGA CGACCGGCCG
GTCATCGGGC GGACCGAGGA GATCCGCCAC TTGATGGGAT TCGTGCCGCA AAGCGAGGAC
TTCCATCCGG CACTCACGGT CGACCAGGCG CTGACCTTCG CTGATCGGCT CCGGAACTCC
TCTCCCGGCG CGCGGGCCAG CCGCGCCGGC CGTGTCCTCG GCATCTGTGA GCGCTTGCAC
TTGGAGGAAA GACAGCACAA ACGTATCCAG ACGCTCTCAG GCGGGGAGAG GAAGCGGCTG
TCGATCGCGC TCGAGCTGAT CAAGCATCCC CGCCTCATCA TGCTCGACGA GCCGACATCG
GGCCTGGACA CCGGTCTGGA CGGCGAGGTC ATGGAGATCC TGGCGGATGT GGCAGGAACC
GGCTGCACCG TCGCGGTGAC GACTCACGCC GTCGAGCATC TTGACGCCGC GGACAACGTC
CTGGTGGTCG GGCCTGAAGG GCGGGTCGTG TTCTTCGGGC CTCCGGCGGA CGTGCTGGGA
ACGCTCGGGT TCGAAGAAGA GGGTTACAGC GGCCTGATGA ACTGGCTGCG AACCGGGGAC
CTCGCCATGG CCGCGAGTGC CTACGCGGAC AGCCCTGCGG CGAAGGAGGC GCGTGACGAA
GCCCGCCACG CGATGGCGCA GCAGAATCGG CACATCCGCG CCGGGGGGCC CGGATCCGGA
CCTCTCGGAG GTGGGAACGC CGAGACGCGT GGTAGGGGAT CCGCGCTGGA CCGGTTGGGC
GCCGGGGTCA GCCGTCTGAT CCGGGACGCC GGGCAGCGCG CGGCGCTCCC TCGCGGCCGG
AACCTGTGGG CCGAGACCGC GGTGCTCGTC CATCGACAAG CATCCCTCCT CCTTGCCCGG
GGCCGTACAG AGCTAGACGC AAGGCTCACC GAGCGCTTCA AGGCGTTGCT GCAGCTTCTC
GCGCCTTTCC TCATCGCCGG CGCGGGGGCG GTCTTGGCTG CCTTGGCCGC GGGGAAGGGG
GGCCTCCGGT CGTATTCCGC AAGCGGAGGC TCACCCACCG CCGCACTGAG CTTCCTGGTG
ACGGTGTGCG TTCTGACCGG CCAGGCCCTG ACCTACAGCG ACATCGTCTC CGAGGTAGGG
GTGATCAGGC GGGAGTGCCG GACGGGATGC CGTCCCGTGA GCGTGATCCT CGCCAAGTGG
CTCGTGTTCT CGCTCATGGC CGCCGTCCAG GCCGCGTTGG TGACCCTTGT CTTCGTTCTG
TGGCGCGGGG CTCCGGTGTC TTCGGTCGCG GTGGGAGGAA CCGCGGACCT CTTCATCGGC
CTGGCCGCCA TGGCCGTCGC AGCGGTCTCG GTGGGTCTGC TGGTCTCGGC CCGTGCGGCC
CGGCTCGAGC AAGCCGTCGG GCTGGCCACA GGGGTCGCCC TCATCCAAGT GGCGCTCAAC
GGGGTGACGA TCGGCCTGAA AGGGCCGACG AACTGGATCG GCTACATCGC CCCCTCGCGC
TGGGGCATGG CGGCGCTCGC CTCGAGTACG AACCTCAACA GCCTCGCCCG GCCGCCCGCC
GGCACCGCGG CCCAGATGAG CGGGCATTCC GACCGAATGT GGGCTCACAC GCAAGGTCAT
TGGCTGGTCG GATTGACGAT GCTCGGCCTT TTCTCCGTCC TCTGTGTCAT CTTGGCCGTC
CTCGCGCTGA AAGTACGACT GCGAAAATCA GAGCGCTGA
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| Protein sequence | MVHWRLRSRA TRPYTPVGAV YYGPFARFAD WYHGRRDGRA PLPDPELVER STPTRDYLAE
RTRDAYEHEY LWYERDRARV AEELASTSIR IRQTRERVTT VRAEQQRNVL EDAGRLGRRA
GEWVTDPRVV KGRRRAEQAW RNRQAQAAIA AVVAEAEALE AHRARLEDDL ARRAAVARAR
VTRLREHCSQ RLSAYRRTLL RYHPETGWAS VVIDAVPPDL PGWLPPASPA PSRAVRRPVA
GARTASRRPG ALRDVAVMDL AALPGSALTF GSAASGPGLL ADPAVPGRFF ALHWQGDAGY
VLHVLEKADI GPYVEGRAVT SRTLPLRPGA TIGLAGTSLQ LLPDGRVERV TDKGRLVVGD
LNHVRRDGKS LLTNVSFAQP GGTVTAVIGP SGAGKTSLFS AILGELGETA KGSIVFDDRP
VIGRTEEIRH LMGFVPQSED FHPALTVDQA LTFADRLRNS SPGARASRAG RVLGICERLH
LEERQHKRIQ TLSGGERKRL SIALELIKHP RLIMLDEPTS GLDTGLDGEV MEILADVAGT
GCTVAVTTHA VEHLDAADNV LVVGPEGRVV FFGPPADVLG TLGFEEEGYS GLMNWLRTGD
LAMAASAYAD SPAAKEARDE ARHAMAQQNR HIRAGGPGSG PLGGGNAETR GRGSALDRLG
AGVSRLIRDA GQRAALPRGR NLWAETAVLV HRQASLLLAR GRTELDARLT ERFKALLQLL
APFLIAGAGA VLAALAAGKG GLRSYSASGG SPTAALSFLV TVCVLTGQAL TYSDIVSEVG
VIRRECRTGC RPVSVILAKW LVFSLMAAVQ AALVTLVFVL WRGAPVSSVA VGGTADLFIG
LAAMAVAAVS VGLLVSARAA RLEQAVGLAT GVALIQVALN GVTIGLKGPT NWIGYIAPSR
WGMAALASST NLNSLARPPA GTAAQMSGHS DRMWAHTQGH WLVGLTMLGL FSVLCVILAV
LALKVRLRKS ER
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