Gene Caci_6929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6929 
Symbol 
ID8338295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8002379 
End bp8003293 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID644960012 
ProductAAA ATPase central domain protein 
Protein accessionYP_003117603 
Protein GI256396039 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00438766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00101304 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAGCC GCACATCTTC CGCGTCGAGC CGGGCGCTGC CCGACGTCGC GTTGCCGGGT 
GTCGCCGACG CCCGGACGCT TCCGGACCGG CAGTTCGCCG ATGCGTGGGC GAGCATCGAG
TTTCCGGAAG GTGTGAAGGA GCGCCTGCTG CGTACGGTGA TCGCCAAGTT CCGGCTGCGC
CGGACGGTGC CGTTCGAGAC GATGCCGCTG CACGGCGTGG TGTTGTTGAC CGGGGTGCCG
GGGGTGGGCA AGACGACGGT CGCCCGCGGC CTGGCGGACA AGACGGCCCG GACGCTGCAC
GGCATCGGCG ACTGGGCATT CATCGAGGTC GACCCGCACG CGCTGGCCGG CTCCGCGCTG
GGCCGCAGCC AGCGCGCGGT GGAGCAGTTG TTCGGGCAGA CGCTGTCCGA GGCTGCTGCG
GACGGGCCGC TGGTGGTGCT GCTGGACGAG GTCGAGACCT TGGCGGCTGA CCGCTCCGCG
CTGTCGATGG AGGCCAACCC GATCGACGTC CACCGTGCGG TCGATGCCGC GCTGGTCGGG
ATCGACCGGC TGGCCCAGCA GCACCCCGAT GTGTTGGTCA TCGCGACCAG CAACTTCCCA
GGGGGGATCG ATCCGGCTCT GACCTCCCGT GCCGACGCGG TCTTTCAGAT TCCGCTTCCG
GACGCTGTCC TGCGGCGGCG GATCTTGGAG AGTACGGCCG CGGCGGTGGC GGCGGCCTTT
CCCGGGGCGC AGTCCTTGTG CGATCCGACC GTGCTGGACG CGGCCGCGCA GTTGTCGGAG
GGGATTGACG GGCGCAGGTT GCGCAAGGCG GTGGCTTCGG CCTGCGCCTG GCGGCCCGAG
GCGCTCGGCG ATCCGGAGAA CGTCACCGGC GAGGACCTGC TCGCCGCGCT GCAGGCGATG
CGGGTGGAGC GGTGA
 
Protein sequence
MTSRTSSASS RALPDVALPG VADARTLPDR QFADAWASIE FPEGVKERLL RTVIAKFRLR 
RTVPFETMPL HGVVLLTGVP GVGKTTVARG LADKTARTLH GIGDWAFIEV DPHALAGSAL
GRSQRAVEQL FGQTLSEAAA DGPLVVLLDE VETLAADRSA LSMEANPIDV HRAVDAALVG
IDRLAQQHPD VLVIATSNFP GGIDPALTSR ADAVFQIPLP DAVLRRRILE STAAAVAAAF
PGAQSLCDPT VLDAAAQLSE GIDGRRLRKA VASACAWRPE ALGDPENVTG EDLLAALQAM
RVER