Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6929 |
Symbol | |
ID | 8338295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8002379 |
End bp | 8003293 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960012 |
Product | AAA ATPase central domain protein |
Protein accession | YP_003117603 |
Protein GI | 256396039 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00438766 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00101304 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAGCC GCACATCTTC CGCGTCGAGC CGGGCGCTGC CCGACGTCGC GTTGCCGGGT GTCGCCGACG CCCGGACGCT TCCGGACCGG CAGTTCGCCG ATGCGTGGGC GAGCATCGAG TTTCCGGAAG GTGTGAAGGA GCGCCTGCTG CGTACGGTGA TCGCCAAGTT CCGGCTGCGC CGGACGGTGC CGTTCGAGAC GATGCCGCTG CACGGCGTGG TGTTGTTGAC CGGGGTGCCG GGGGTGGGCA AGACGACGGT CGCCCGCGGC CTGGCGGACA AGACGGCCCG GACGCTGCAC GGCATCGGCG ACTGGGCATT CATCGAGGTC GACCCGCACG CGCTGGCCGG CTCCGCGCTG GGCCGCAGCC AGCGCGCGGT GGAGCAGTTG TTCGGGCAGA CGCTGTCCGA GGCTGCTGCG GACGGGCCGC TGGTGGTGCT GCTGGACGAG GTCGAGACCT TGGCGGCTGA CCGCTCCGCG CTGTCGATGG AGGCCAACCC GATCGACGTC CACCGTGCGG TCGATGCCGC GCTGGTCGGG ATCGACCGGC TGGCCCAGCA GCACCCCGAT GTGTTGGTCA TCGCGACCAG CAACTTCCCA GGGGGGATCG ATCCGGCTCT GACCTCCCGT GCCGACGCGG TCTTTCAGAT TCCGCTTCCG GACGCTGTCC TGCGGCGGCG GATCTTGGAG AGTACGGCCG CGGCGGTGGC GGCGGCCTTT CCCGGGGCGC AGTCCTTGTG CGATCCGACC GTGCTGGACG CGGCCGCGCA GTTGTCGGAG GGGATTGACG GGCGCAGGTT GCGCAAGGCG GTGGCTTCGG CCTGCGCCTG GCGGCCCGAG GCGCTCGGCG ATCCGGAGAA CGTCACCGGC GAGGACCTGC TCGCCGCGCT GCAGGCGATG CGGGTGGAGC GGTGA
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Protein sequence | MTSRTSSASS RALPDVALPG VADARTLPDR QFADAWASIE FPEGVKERLL RTVIAKFRLR RTVPFETMPL HGVVLLTGVP GVGKTTVARG LADKTARTLH GIGDWAFIEV DPHALAGSAL GRSQRAVEQL FGQTLSEAAA DGPLVVLLDE VETLAADRSA LSMEANPIDV HRAVDAALVG IDRLAQQHPD VLVIATSNFP GGIDPALTSR ADAVFQIPLP DAVLRRRILE STAAAVAAAF PGAQSLCDPT VLDAAAQLSE GIDGRRLRKA VASACAWRPE ALGDPENVTG EDLLAALQAM RVER
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