Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6926 |
Symbol | |
ID | 8338292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8000516 |
End bp | 8001397 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644960009 |
Product | DNA polymerase beta domain protein region |
Protein accession | YP_003117600 |
Protein GI | 256396036 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000143596 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000343004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGAGCA TCGAGGACGC GTTCGGCAAG TTCCGAACCC GCCTGGAGAC CACCGACCGC GAGAACGCCA CCGCCAGCGC CCGCCAGCAG CGCATCCGGG AGCAACTCGC CAGCGACCTG GAGATCGCCG AGGACTTCCT GACCGGTTCC TACCGGCGTC AGACCAAGAC CAAGCCGCTG CGCGACATCG ACATCATGGT GGTCCTCCGG GACACGAACT TCCTAAACCG CGATCCCGCC GCGATCCTGA AGGAGGTCGT GCAGATCCTC GAGCCCTACT ACCCGGGCCG TGTGGTCAGC GACCGCCGCG CGGTGCGCGT CGACTTCGGT GTCGCTAGAG TCACAGACCT GGACGACGAG ATCATCTCCT TCGACGTGGT CCCCGCCTTC GCCGACGGCG ACAATTACCT GATCCCTGAT GACATCCTGG GGGAGTGGAT CTCCACAAAT CCGCGGATCC ACGCCGAGCT GGCGACCCGT GCGAACAAGG ACTTCGCCGA CCAGTGGAAG CCGCTCATCA AGATGATCAA GAAGTGGAAT CAGGAGAGCG GGTCGCCGGT GCAGCCCGGC TTTTTGTTGG AGGTCATGGC CCTCGACATC CTTTCGGGCC CGTGGACCGG GCGCCATCCG TACGAGCTGC GCGGCTTCTT CGCCACCGCC GCCGACCGCA TCGACGAGGG CTGGCCGGAC CCGGCCGGGC TGGGCCCGGA CGTCTCCGAC GTCCTTGACA ACGATCCGGC GGCGATGGCC GTGTCTCGCC GGGCGCTCGG CGAGGCCGAG GCCGCGTGTA CCCGCGCGAT CAAGCATGAC CAGGCTGGCC GCACCGGCGA GGCACTGGCC GAGTGGCAGC GCCTCTTCGG CTCGTTGTTC GCGAAGTCAT GA
|
Protein sequence | MMSIEDAFGK FRTRLETTDR ENATASARQQ RIREQLASDL EIAEDFLTGS YRRQTKTKPL RDIDIMVVLR DTNFLNRDPA AILKEVVQIL EPYYPGRVVS DRRAVRVDFG VARVTDLDDE IISFDVVPAF ADGDNYLIPD DILGEWISTN PRIHAELATR ANKDFADQWK PLIKMIKKWN QESGSPVQPG FLLEVMALDI LSGPWTGRHP YELRGFFATA ADRIDEGWPD PAGLGPDVSD VLDNDPAAMA VSRRALGEAE AACTRAIKHD QAGRTGEALA EWQRLFGSLF AKS
|
| |