Gene Caci_6926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6926 
Symbol 
ID8338292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8000516 
End bp8001397 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID644960009 
ProductDNA polymerase beta domain protein region 
Protein accessionYP_003117600 
Protein GI256396036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000143596 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000343004 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAGCA TCGAGGACGC GTTCGGCAAG TTCCGAACCC GCCTGGAGAC CACCGACCGC 
GAGAACGCCA CCGCCAGCGC CCGCCAGCAG CGCATCCGGG AGCAACTCGC CAGCGACCTG
GAGATCGCCG AGGACTTCCT GACCGGTTCC TACCGGCGTC AGACCAAGAC CAAGCCGCTG
CGCGACATCG ACATCATGGT GGTCCTCCGG GACACGAACT TCCTAAACCG CGATCCCGCC
GCGATCCTGA AGGAGGTCGT GCAGATCCTC GAGCCCTACT ACCCGGGCCG TGTGGTCAGC
GACCGCCGCG CGGTGCGCGT CGACTTCGGT GTCGCTAGAG TCACAGACCT GGACGACGAG
ATCATCTCCT TCGACGTGGT CCCCGCCTTC GCCGACGGCG ACAATTACCT GATCCCTGAT
GACATCCTGG GGGAGTGGAT CTCCACAAAT CCGCGGATCC ACGCCGAGCT GGCGACCCGT
GCGAACAAGG ACTTCGCCGA CCAGTGGAAG CCGCTCATCA AGATGATCAA GAAGTGGAAT
CAGGAGAGCG GGTCGCCGGT GCAGCCCGGC TTTTTGTTGG AGGTCATGGC CCTCGACATC
CTTTCGGGCC CGTGGACCGG GCGCCATCCG TACGAGCTGC GCGGCTTCTT CGCCACCGCC
GCCGACCGCA TCGACGAGGG CTGGCCGGAC CCGGCCGGGC TGGGCCCGGA CGTCTCCGAC
GTCCTTGACA ACGATCCGGC GGCGATGGCC GTGTCTCGCC GGGCGCTCGG CGAGGCCGAG
GCCGCGTGTA CCCGCGCGAT CAAGCATGAC CAGGCTGGCC GCACCGGCGA GGCACTGGCC
GAGTGGCAGC GCCTCTTCGG CTCGTTGTTC GCGAAGTCAT GA
 
Protein sequence
MMSIEDAFGK FRTRLETTDR ENATASARQQ RIREQLASDL EIAEDFLTGS YRRQTKTKPL 
RDIDIMVVLR DTNFLNRDPA AILKEVVQIL EPYYPGRVVS DRRAVRVDFG VARVTDLDDE
IISFDVVPAF ADGDNYLIPD DILGEWISTN PRIHAELATR ANKDFADQWK PLIKMIKKWN
QESGSPVQPG FLLEVMALDI LSGPWTGRHP YELRGFFATA ADRIDEGWPD PAGLGPDVSD
VLDNDPAAMA VSRRALGEAE AACTRAIKHD QAGRTGEALA EWQRLFGSLF AKS