| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6925 |
|---|
| Symbol | |
|---|
| ID | 8338291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7999599 |
|---|
| End bp | 8000519 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644960008 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117599 |
|---|
| Protein GI | 256396035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000410005 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00013532 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC CGCACCGCCC CGTGCCCGTC GGGGCCGGGG CCGATATCAG GACCCGTCAG
GACGAAATCG AACACCTTCG TCGGCTGCGC GCCTACAGCC ACATGTACAA CTCGGCGCAG
ATGTGGCGAC GACTGCGGGC GGCCGGCACG TTGGCCCTGG CTTTGATTGC CCCAGTGGTC
GCGGTGTTCG TGCCGTCCTC GACCGACACT CTCGCTGCGG TCGGCGCGGG GTGGCTGGTC
ATCGGTCGCA CCGTGCTGAC CCGGCTGGAG CAGCACGCCC GCGGCGACGC CGTGCGCGCG
CACGAGCTGT ACGACACCAA GCTGTTCCAC CTGCCGTGGA ACCAATCCCT GGCCGGTAGT
CCGCCGTCCC CGGACGACAT CGTCCGGGCG GCCGAGCGCG TTCCCGACCA CGAGCGCTAC
CACGACTGGT ACAGCATCGA CCTGACCGGC GTCGCATGGC CCGGCGACGT GCTGCTATGC
CAACGACAGA GCATGGTCTG GAGTCGCAGT GACCACCGCG CCTACGGCAA CGCGGTCCTG
GCCGCAGGTC TAGGGTGGTT CACCGCCGGC CTCGTCCTGG CCGTGGTCAA AGACCTGTCG
CTGTCCGACT ATCTGATCAA GATCTTCCTG CCTTGCGCGC CAGCGTTCCT GGACACCTCC
GAACTGGCCC ACGAGCACCG CCAGCACTCC ATCGCCCGCG AACAGACCGA GAACGACATC
CGCGAGTTGT GGAATACGTA CCGACTCGCT CCGGATAATC TCCCGGTCGG TGAGACCCGT
CGGATCCAGG ACTCCGCGTT TCAACTGCGT CGCACCGGGC CACGAGTGCC AACCTTCTAC
TACCGGCTTC GCCGCAGCTC CTCCCAGCAC GCCACCGTTA CAGCGACTGC CGAACTCATC
TGTCCTGAAA ACAGCCCTTG A
|
|---|
| Protein sequence | MTGPHRPVPV GAGADIRTRQ DEIEHLRRLR AYSHMYNSAQ MWRRLRAAGT LALALIAPVV
AVFVPSSTDT LAAVGAGWLV IGRTVLTRLE QHARGDAVRA HELYDTKLFH LPWNQSLAGS
PPSPDDIVRA AERVPDHERY HDWYSIDLTG VAWPGDVLLC QRQSMVWSRS DHRAYGNAVL
AAGLGWFTAG LVLAVVKDLS LSDYLIKIFL PCAPAFLDTS ELAHEHRQHS IAREQTENDI
RELWNTYRLA PDNLPVGETR RIQDSAFQLR RTGPRVPTFY YRLRRSSSQH ATVTATAELI
CPENSP
|
|---|
| |