Gene Caci_6920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6920 
Symbol 
ID8338286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7994619 
End bp7995389 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID644960004 
Producthypothetical protein 
Protein accessionYP_003117595 
Protein GI256396031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000215258 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000122143 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGGA TCATCGGAAT CTGCGGCGTC GGCAACGACC CGCGCACCCA TGCGTTCCGC 
AGCGTGGAGA AGGAATGGAT CGGCGCCCTG CTTCGCGGAA TGAGATGCAC TGGAACGACG
GAAGATCCGG TGCTCGATTT CGAGTGCTTG TGTTTCGCGG ACTTGCTAGA TCCGGCTGAT
CCGTTCGGCG GTGGCGTCCA ACAGGACTTC ATCTGTCGTT TTGGCGGGCG GCGGGTCAAC
AGGACCCGGG ATTTCCTGAC CCACGTGTCC GCCTATCTCG CCGACCAACG TGTCCGGGAG
AAGGTCCAGC AACGGATCGC CGACCGCGTC GGGCCCGACA CCCGGGTCTT GATAGGGCAT
TCACTCGGAT CGGTGGCAGC CTACGAAACC TTGTGCCGGG CCTCAGCTCA GGGCGTTCAG
ACACTGATCA GCCTGGGATC GCCGCTCGGC TTCCACCGTT CGGTCCTGCG CACCCGGACT
GCGCCGAACG CGGCGGGTCG CTATCCCTGG CCGGTCGGTC TGCGCCGCTG GGTCAACGTT
TATGACTGGA AGGACCCGTT CGCGGCCAAG GTGAGGCTAC GGCCGCTGTT CGGCGACGGC
CGTCAGGTAG AGGACTGCCG GGTGTGGAAT TGGGCATGGC CACATGCCGC CACCGCCTAC
CTGATGGCTC GGCCCACGGC ACAGGCCGTC ACCGACGCCC TGCTCTCGGC GTCGGACTTT
CTGCTCTGTA AAAGTGTGCA AGCAGACGCG GTCGGTGTGC GCCAACCATG A
 
Protein sequence
MARIIGICGV GNDPRTHAFR SVEKEWIGAL LRGMRCTGTT EDPVLDFECL CFADLLDPAD 
PFGGGVQQDF ICRFGGRRVN RTRDFLTHVS AYLADQRVRE KVQQRIADRV GPDTRVLIGH
SLGSVAAYET LCRASAQGVQ TLISLGSPLG FHRSVLRTRT APNAAGRYPW PVGLRRWVNV
YDWKDPFAAK VRLRPLFGDG RQVEDCRVWN WAWPHAATAY LMARPTAQAV TDALLSASDF
LLCKSVQADA VGVRQP