| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6907 |
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| Symbol | |
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| ID | 8338273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7978271 |
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| End bp | 7979680 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644959994 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003117585 |
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| Protein GI | 256396021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00437458 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000226989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGATCG CGCTAGCCTT CGCCCTGTTG ATCGGGTCGG TTGGCCTGAC CTCCATGGCC
GCTTCCCCCG CCTACGCCAC CACGTCGCAG TTCCATGGGG TGAACTGGGC CGATCCGGAC
GACAACTTCA TCACCGGCCC GAACATCCCA GTCGGGCTGT CGGCGTCGGA CAACTACGCG
ACCGTGTACG CGAAGTCCAC GGCGATCCTC AAGGGCTTCC AGGCCATCGG GGCCAACACG
GTGCGCATGG GGATCAACGC CGCGACGACC TCCGGATCAT GGTGGAACAG CTACACGGCG
GCCCTGGACG CCGCAAGCGA CTTGGGTATG AACGTCGTCA TCGCTCCGTG GCTCCAGAAC
GGCAAGGTCA GCGACACGGC GTCGTTCTAC GCCATGTGGA ACACGGTCAT CAACAAGTAC
GGGTCGAAGA GCAACTTCTA CTTCGACATC ATGAACGAGC CCTACGCGTA CAGCGCCACC
GACCTGACCA ACTTCGAGGC TGACTGGCTT GCGCACTACC CCAATCTGCC GCGGGGCCGC
GTGATAGTCC CGGGCACTTG GGACGACGAG TCCCTGTGTG CTGAAGGAGC TGATTCCCGA
CTCGCGGGGA CCTTGCTGTC CATCCACATC TACGGCATGT TCGGGAACTC GCACACGACC
GAGGCTGCTT GGGTCACGAA CTTCGAGAAC AACATGTGCG GCTACGCGAG TCGCGCTGTG
CTGACGGAGT TCGGAGTGGC GATGAACACC GGCGCCTATT ACGACGGTGC CAGAGACGGC
AACAATGATG TCTCCTACCT GTACGGGATC ACCGATACGG TCCGCAAGCT GGGCATAGGA
TCCATCCTCT GGACGGGCGT GAAGCAGGCC GACCAGAGCG TGGGTCCAGG GCCGTGCGAG
AACGCATCCT GCGCGATCAC CTCGGTCAGC GGGAGCGGAA CGAACCTCTC GCTGAGCGTG
ACCAACCGGT CTGGTCTCGA CAGGATCCAG TACGGATGGG GAGGCGGAAA CTCCGGCGCC
GTCAGTACCG CGGTGCTTCG AGCAACCGCA TCCAACCGGT GCCTGGATGT GCCGAACGCC
TCCACCACCA ACGGCACTCA AACTGAGATC TGGGACTGCA ACGGCGGCAG CAACCAGTCC
TGGACGTTGA ATTCTGCCAA GTCCCTTGTC GTCTACGGCA ACAAGTGCCT CGATGCCGCC
AACGCTGGTA CTGCGCCCGG CACACCGGTC ATCATCTGGG ACTGCAACGG CGGCACGAAC
CAACAGTGGA CGATGAATAG CAACGGCACT GTCACCGCTG TTCAGTCCGG TCTCTGCCTC
GACGTCACCA AGGGCGGAAC CTCTAACGGC ACAGCGATCG AGCTGTGGAC CTGCAACGGC
GGCAGCAATC AGAAGTGGGC GCGCCAGTAA
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| Protein sequence | MTIALAFALL IGSVGLTSMA ASPAYATTSQ FHGVNWADPD DNFITGPNIP VGLSASDNYA
TVYAKSTAIL KGFQAIGANT VRMGINAATT SGSWWNSYTA ALDAASDLGM NVVIAPWLQN
GKVSDTASFY AMWNTVINKY GSKSNFYFDI MNEPYAYSAT DLTNFEADWL AHYPNLPRGR
VIVPGTWDDE SLCAEGADSR LAGTLLSIHI YGMFGNSHTT EAAWVTNFEN NMCGYASRAV
LTEFGVAMNT GAYYDGARDG NNDVSYLYGI TDTVRKLGIG SILWTGVKQA DQSVGPGPCE
NASCAITSVS GSGTNLSLSV TNRSGLDRIQ YGWGGGNSGA VSTAVLRATA SNRCLDVPNA
STTNGTQTEI WDCNGGSNQS WTLNSAKSLV VYGNKCLDAA NAGTAPGTPV IIWDCNGGTN
QQWTMNSNGT VTAVQSGLCL DVTKGGTSNG TAIELWTCNG GSNQKWARQ
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