Gene Caci_6895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6895 
Symbol 
ID8338261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7964306 
End bp7965061 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID644959983 
Producthypothetical protein 
Protein accessionYP_003117574 
Protein GI256396010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000881431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.23587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG GCTTGTGCTC GCTGAAGTCT TCGCCTGGGG TCACCACAAC GACTTTGGCG 
ATTGCCGGAT GCTGGCCGGC GCATCTCACG ACGCCGACCG TCATCGAGCT GGACGCGCGT
GGCGGAGACG TTGCGTGGCG CTACGGAATG GCGGCGGACC CGGGTTTGCG GTCGCTCGCA
GCGGCATCCC GGTTGGACCC TCAACCGTCT GCGTTGGCCG GTCACGCCCG CCCTGTGGGC
GGGTCTGCGG TGCCAACGGT GACTGCACCT GCCGAACGAG AGCCAGCACG CCAGGCAGTG
GCCGCGCTGA AGCCGTTGCT GAAAGTGCTG CGTGATGAGC GTGACGCTGT GCTGGTAGAC
CTGGGCGAGA TCGACCCCAG GGAATCGAGC ACGGCGGATC TGCTAGGAAG CCTGGCGTCG
CTACTGGTGG TGGCTAGGGC TGTGCCCGAG CAGGCGGCCC GGGTCGCTGC GGCTGCCTCC
GACCTACGTC TGACGAACCG GAATGTCAGA GTGCTGTTCA TCGGCGATCT CCGCGAAGGA
GACGCCGAAA CGGTGGCCGG TCTGCCGACG GCGGGAGTGC TACCACTGAT CAACCCGAAC
GCCTCGCTGT TCTCACGGCT CGCGGACCGT CGATCACGCA GGGCTTTCGG GGGAACTACG
GTTCGCGTGG CCGAGGAATT GGCCTGGACG ACGGTGTCAC GTGAGCGCGA GGTCGTGACG
GCTTCGGCAT CGGATGGCCC GGAGGCCGTG CGATGA
 
Protein sequence
MLIGLCSLKS SPGVTTTTLA IAGCWPAHLT TPTVIELDAR GGDVAWRYGM AADPGLRSLA 
AASRLDPQPS ALAGHARPVG GSAVPTVTAP AEREPARQAV AALKPLLKVL RDERDAVLVD
LGEIDPRESS TADLLGSLAS LLVVARAVPE QAARVAAAAS DLRLTNRNVR VLFIGDLREG
DAETVAGLPT AGVLPLINPN ASLFSRLADR RSRRAFGGTT VRVAEELAWT TVSREREVVT
ASASDGPEAV R