| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6878 |
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| Symbol | |
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| ID | 8338244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7947087 |
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| End bp | 7949888 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959966 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003117557 |
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| Protein GI | 256395993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0414286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGC GTCCACTACC GCTGACGAAA TCAAGAGCTT TCGTCGCCCT CACCGCTCTG
AGTCTCGGCG CCGCCGGGCT CCTGAGCGCC GAACTCCCCG CCTCCGCCGC CCCCGCGGCG
TCGGCCACGT GTCCCTGGGT CGGGTCGAAC GCCCCGGTGG CCAGCCGTGT CAGCCAGCTG
ATGGCCAAGA TGAGCCTGTC GCAGGAAATC TCCATGATGA CCGGCACCAA GGGGTCGAGC
TTCGTGGGGG AGACCCCGGC GATCGGCTCG CTGTGCATCC CCGCCATGAA CCTGGAGGAC
GGGCCGGCCG GCGTCGCCGA CGGCATGACC GGCGTCACCC AGCTGCCCGC CCCGGTGAGC
GCGGCCGCCA CCTGGGACAC CGGCGCGGAA TCCGCCTACG GCAAGGTGAT CGGCTCCGAG
GAGGCCGCCA AGGGCTCCAC CGTCGATCTC GGGCCGACGA TCAACATCGT GCGGGACCCG
CGCTGGGGCC GGGCCTTCGA GTCGATCGGC GAGGACCCGT ACCTCAACGG CGTTCTCGGC
GCCGCGGAGA TCCGCGGAGT GCAGTCGACC GGTGAGATGG CGCAGGTGAA GCACCTGGCC
GCCTACAACC AGGAGACCCA CCGCAACACC TCCAGCGACA ACGTGATCGT CGACCAGCGC
ACGCTGGAGG AGATCTACCT GCCGGCGTTC GACACGTCGG TGGGCTCGGG CGCGGCTTCG
TCGGTCATGT GCTCGTACAG CACGATCAAC GGGACCTACG CCTGCCAGAA CCCGAACATC
ATGAACGATG TCATCCACAA GCAGTTCGGC TCCAACGCGT TCATCACCTC GGACTGGGGC
GCCCTGCACA CGACGGCCGG CGGCGCGAAC GCCGGGCTGG ACCAGGACAT GCCCGGTGAT
GACGGCTACT ACGGTGGCGC GCTGCAGACA GCCGTCAACA ACGGCCAGGT CAGCAAGGCG
ACGATCGACG CCGCGGTCCG CCGCGTCCTG ACCCAGATGT TCGGCTTCGG CATGTTCGAC
AACGTCTCCA GCGGCTCGCC GCGCGCGACG GTGACGTCCT CGGCGCACAC CGCCACCGCC
CGGCAGATCG CCGACCAGGG CACCGTGCTG CTGAAGAACG CCAACAACCA GCTGCCGCTG
ACCTCCTCGA CGAAGTCCAT CGCCGTGATC GGTGCGGACG CCTCCACCAG CGTTCGCAGC
GCCGGTGGCG GTAGCGCGTC GGTCAAGGCC GGCAGTGTGG TCAGCCCGCT GGCCGGGATC
ACCTCGCGGG CCGGCAGCGG GGTGACGGTG ACCTACAACG ACGGCTCCTC CTCCAGCTCG
GCCGCGACGG CCGCCGGCAA GGCGAACGTG GCAGTGGTCT TCGTCAGCAA GTCCGAGAGC
GAGGGCGGCG ACCTGTCGAA CATCGACCTG GCCAGCTCGG ACAACGCGCT GATCTCGGCG
GTCGCCAAGG CCAACCCGCA CACCGTGGTG GTGCTGAACA CCGGCTCCGC GGTCACCATG
CCGTGGCTGT CCTCGGTCTC CGGCGTCTTC GAGGCCTGGT ACTCCGGCCA GGAGGACGGC
AACGCGATCG CCGACCTGCT GTTCGGCGAC GTCGACCCGT CGGGGCACCT GCCGGTGACC
TTCCCGACGT CGCTCAGCCA GGTGCCGGCG AACACCGCCG CCCAGTGGCC GGGCGCCAAC
AACAAGGTGG AGTACTCCGA GGGCCTGCAG GTCGGCTACC GGCACTACGA CGCGACCAAC
CAGACCCCTT TGTTCCCCTT CGGCTTCGGC CTGTCGTACA CGTCCTTCAG CTTCAGCAAC
CTCACTGTCG GCTCGCTGAC CAAGGGCGGC TCCGCCACCG TCACCGCGAA GGTGACCAAC
ACCGGCAGCC GTGCCGGCTC CGAGGTCGCC CAGCTCTACG TCGTGGACCC GTCGTCCTCC
GGTGAGCCGT CGAAGCAGCT CCAGGGCTTC GGCAAGGTCA CCCTGGCCGC CGGCGCCAGC
ACCACGGTCA GCTTCCCCGT CACCGAGGAG AACCTCCGGC ACTGGAACAC CGGGTCCAAC
GCCTGGACCA CGGATACCGG CGCCTACGGC ATCCGCGTCG GCGACTCGGC GGCGAACATC
CCGCTGAGCG GCACCCTGAA CGTCACCTCG GCCCAGCTCG GCCAGCCGGT GACGGTCACC
AACCCGGGCC CGCAGGCCAC CATCGCGGGC GCGACGGTCT CCGTGCCGGT CACCGCGAAG
GACTCGACCG GCGGCCAGAC GCCGGCGTTC AGCGCCACCG GGCTCCCGGC CGGCCTGAGC
ATCTCCGCCT CGGGCACCAT CACCGGCACG CCCACCAGCG CGGGCACCAC GACCGTGGAC
GTGACGGCGA AGGACGGCAA CGGCGCCACC GCGACGACCT CGTTCGTGTG GACCGTCTCG
CCCTCCACCG CCGGGGTGCC CACCGTCCCG TACGTCGGTC AGGGCGGCAA GTGCCTCGAC
CTGGCGGCGG ACGACAACAC CAACGGCGCC AAGGTCGAGA TCTACACCTG CAACAACACC
AGCGGCCAGT CCTGGAGCCA CCTCGCCGAC GGCACCCTCC GGTCCGCCGG CAAGTGCATG
GACGTCAAGG GCGCCGGAAC AGCCAACGGC ACCCTCGTCC AGATCTACGA CTGCAACGGC
ACCGGTGCAC AGGTCTGGAA GAGCGGCTCC AACGGCTCGT TGATAAACCC GGCCTCCGGC
AAGTGCCTCG ACGACCCGAA GTCCTCGACC ACTGACGGCA CCCAGCTGCA GATCTGGGAC
TGCAACGGCA ATTCGAACCA GTCTTGGGTC CCGAGGGCTT GA
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| Protein sequence | MRVRPLPLTK SRAFVALTAL SLGAAGLLSA ELPASAAPAA SATCPWVGSN APVASRVSQL
MAKMSLSQEI SMMTGTKGSS FVGETPAIGS LCIPAMNLED GPAGVADGMT GVTQLPAPVS
AAATWDTGAE SAYGKVIGSE EAAKGSTVDL GPTINIVRDP RWGRAFESIG EDPYLNGVLG
AAEIRGVQST GEMAQVKHLA AYNQETHRNT SSDNVIVDQR TLEEIYLPAF DTSVGSGAAS
SVMCSYSTIN GTYACQNPNI MNDVIHKQFG SNAFITSDWG ALHTTAGGAN AGLDQDMPGD
DGYYGGALQT AVNNGQVSKA TIDAAVRRVL TQMFGFGMFD NVSSGSPRAT VTSSAHTATA
RQIADQGTVL LKNANNQLPL TSSTKSIAVI GADASTSVRS AGGGSASVKA GSVVSPLAGI
TSRAGSGVTV TYNDGSSSSS AATAAGKANV AVVFVSKSES EGGDLSNIDL ASSDNALISA
VAKANPHTVV VLNTGSAVTM PWLSSVSGVF EAWYSGQEDG NAIADLLFGD VDPSGHLPVT
FPTSLSQVPA NTAAQWPGAN NKVEYSEGLQ VGYRHYDATN QTPLFPFGFG LSYTSFSFSN
LTVGSLTKGG SATVTAKVTN TGSRAGSEVA QLYVVDPSSS GEPSKQLQGF GKVTLAAGAS
TTVSFPVTEE NLRHWNTGSN AWTTDTGAYG IRVGDSAANI PLSGTLNVTS AQLGQPVTVT
NPGPQATIAG ATVSVPVTAK DSTGGQTPAF SATGLPAGLS ISASGTITGT PTSAGTTTVD
VTAKDGNGAT ATTSFVWTVS PSTAGVPTVP YVGQGGKCLD LAADDNTNGA KVEIYTCNNT
SGQSWSHLAD GTLRSAGKCM DVKGAGTANG TLVQIYDCNG TGAQVWKSGS NGSLINPASG
KCLDDPKSST TDGTQLQIWD CNGNSNQSWV PRA
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