| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6873 |
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| Symbol | |
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| ID | 8338239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7940082 |
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| End bp | 7941851 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644959962 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003117553 |
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| Protein GI | 256395989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.783664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC CGATCACTTT GCGGCCACCC GGCACCGGAG GCATCCGGCG CCGCGCTTGG
TGGTCCCTGC TCGCGGTCAC CGCCCTGCTG GCCTCCCTGC TGTACGGGGC CGCGTTCTCC
ACCGCACCGT CGGCTCACGC GGAGTCCAAC GGCGCCGCGG TGTCACCCCA GTCGGGGTGG
AGCAGTTGGA GCTTCATCCG CAAGAACCCG ACCGAGGCGG CCATCGAGGC GCAGGCCGCC
GCGATGGCCT CCACCGGCCT GGTCAGCCAC GGTTTCTCCC TCATCAACAT CGACGACTTC
TACTACCTGA GCCCCGGGTC GCACGTCGAC TCCTACGGGC GCTGGGTGGT GGACACCGCC
AAGTTCCCGC ACGGTATGAA GGCGGTCGCG GACTACGTGC ACGGCAAGGG TGAGAAGTTC
GGCATGTACC TGACGCCGGG CATCCCGGTG GCGGCGTACA ACCAGAACAC CCCGATCCAG
GGCACGTCGT ACCACGCCCG CGACATCGTC TCCGACACCA CGGACTACGA GAAGAACTAC
AACTTCGCCA ACGGCGCGAT GTACTTCATC GACTACGCCA AGAACCCCGC CGCGGCGCAG
GCGTTCGTCA ACTCGTGGGC GAATCTGCTC GCCTCCTACG GCGTGGACTA CCTCAAGATG
GACGGCGTCG GCACGTCCGA CAAGGCCGAC GTGCAGCACT GGTCCCAGGC GCTCGCCCAG
TCCGGGCGCA CCATCCAGTT CGAGCTGTCC AACTCCCTGG ACATCAACCA GGGCCCGTTC
TGGAAGCAGT ACGCCAACGG CTGGCGGGTC GGCGGCGACG TGGAGTGCTA CTGCAGCACC
CTGACCAACT GGAGCAACGT CTCCAAGCGG TTCAACACCC TGCCGGCGTG GGTGCAGTAC
GACAGCCCCG GCGGCTGGGG CGACCCGGAC TCGGTCGAGG TCGGCAACGG CTCGCAGGAC
GGTCTGACCC CCGACGAGCG GCGCACCCAG CTCAGTCTGT GGGCCATCTC CGCGGCACCG
CTGACCCTGG GGACCGACCT GACCCACATG GACTCCGGCG ATCTGGCTCT GCTGACCGAC
GACGAGGTGC TCGGCGTCGA CCGTGCCGGA CACCCCGCGC ACCCGGTCGC GCAGGGCGCA
ACGCAGCAGA CCTGGTGGGC GTACAACGGC GACGGCACCT ACACCGTCGG CCTGTTCAAC
CTCGCCGGCT CGGCCGCCAA CGTCACCGCG AACTGGTCCG ACCTCGGCTT CACCGGCGGC
GCCGCGGTCC GCGACCTGTG GAGCCGCACC AACCTGGGCT CCTCGTCCGG GAAGTTCACC
GCCTCCGTGC CCGCCCACGG CTCCCGGCTG CTGCGCGTCA CCCCGGCCTC CGGGCACGGA
ACGATCGGGG CGCCCATGGT CAGCAAGCTC TCCGGGCGCT GCGCGGACTC CCCGCAGGGC
ACCACGTACA ACGCCGTCCA GGTGCAGGTC TGGACCTGCA ACGGCGGCCC CAACCAGAAC
GTCACCTACA ACTCCTCGTC GAAGACGCTG GTGCTGGAAG GCAAGTGCTT CGACGCGCAC
AACAACCAGA AGACCGCCGG GACGCACGTC GAGATCTACG ACTGCAACGG CGGCGCCAAC
CAGCAATGGA CCAAGAACAG CAACGGCACC ATCACCGGCG TCCAGTCCGG CCTGTGCCTC
GACGTCACCG GCGCCACCAA CCCCAACGGG TCGGGCCTGG AGCTGTGGAC GTGCAACGGC
GGCCAGAACC AGCAGTGGAC GCTCGGGTGA
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| Protein sequence | MNPPITLRPP GTGGIRRRAW WSLLAVTALL ASLLYGAAFS TAPSAHAESN GAAVSPQSGW
SSWSFIRKNP TEAAIEAQAA AMASTGLVSH GFSLINIDDF YYLSPGSHVD SYGRWVVDTA
KFPHGMKAVA DYVHGKGEKF GMYLTPGIPV AAYNQNTPIQ GTSYHARDIV SDTTDYEKNY
NFANGAMYFI DYAKNPAAAQ AFVNSWANLL ASYGVDYLKM DGVGTSDKAD VQHWSQALAQ
SGRTIQFELS NSLDINQGPF WKQYANGWRV GGDVECYCST LTNWSNVSKR FNTLPAWVQY
DSPGGWGDPD SVEVGNGSQD GLTPDERRTQ LSLWAISAAP LTLGTDLTHM DSGDLALLTD
DEVLGVDRAG HPAHPVAQGA TQQTWWAYNG DGTYTVGLFN LAGSAANVTA NWSDLGFTGG
AAVRDLWSRT NLGSSSGKFT ASVPAHGSRL LRVTPASGHG TIGAPMVSKL SGRCADSPQG
TTYNAVQVQV WTCNGGPNQN VTYNSSSKTL VLEGKCFDAH NNQKTAGTHV EIYDCNGGAN
QQWTKNSNGT ITGVQSGLCL DVTGATNPNG SGLELWTCNG GQNQQWTLG
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