| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6871 |
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| Symbol | |
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| ID | 8338237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7938224 |
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| End bp | 7939147 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959960 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003117551 |
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| Protein GI | 256395987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.579541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TCGCGCCGCC CGGCCCCGAG GCGACCCGGC CCGCGCCGCC CCGCAACGCC
CTGCGACACC GGCTGGCCGA GCGCGGCGTC GACCGGACCC TGCTGCTGCT CGTGCCCGGC
CTGCTGGCCT CGGCCGCGCT GTTCTGCTAC CCGTTCCTGT ACGGGCTGCA GATCTCCTTC
CAGCCGAAGA CGGGCGGCTT CTTCGGCTCC TACCGCGCCT TCTTCGGCAA CTCCTTCGCG
GTCGGCTCCA TCGGCATCAC CTTCAAGCTC GCGCTGCCCG CCGCGATCAT CAACGTCGGC
GCGGCCGTCC CGATCTCGTA CCGGATGCGC AAGGAGTTCC GGGGCAAGCG GCTCCTTCTC
GCGCTGCTCG TCGTCCCGAT CACGCTGGGC ACGGTGCTGA CCGCCGAAGG CATCGTGGAG
TTCTTCGGCC CGGTCGGCTG GTTCAACCAG ACCCTGCACG CGCTCGGCCT GGCCGCCTCG
CCGGTGAAGC TCACCTACGA CTACTGGGGC GTGCTGCTGT CGCTGATCAT CAGCGGCTTC
CCGTTCGCCT TCCTGCTCAC CAACTCCTAC CTCTCGGGAA TCCACCCGGC CCTGGAGCGG
GCCGCCGCCA CGCTCGGCGC GGACTGGCGG CAACGCTTCC GGCACATCAC CTTCCCGCTG
CTGCTGCCCG GGCTGATGAC GACGTTCTGC CTGACGTTCG TGCTGGCCTT CGCGGTGTTC
CCGTCGGCGA TGATGGTCGG CGACCCCGAC GGCAGGACCC ATGTCATCTC CGTCGAGGCC
TACGAGACGG CCCTGGAGCA CTTCAACTAC TCCGAGGGCT CGGCGATCGC CATGGTGATG
ACCGCCCTGA TGCTGGCCGT GGTCGGCGTC GCGATGGGAC TGCGCTCCCG CCTCTACCGG
GGATCCACAG GGGGCAAAGG ATGA
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| Protein sequence | MSALAPPGPE ATRPAPPRNA LRHRLAERGV DRTLLLLVPG LLASAALFCY PFLYGLQISF
QPKTGGFFGS YRAFFGNSFA VGSIGITFKL ALPAAIINVG AAVPISYRMR KEFRGKRLLL
ALLVVPITLG TVLTAEGIVE FFGPVGWFNQ TLHALGLAAS PVKLTYDYWG VLLSLIISGF
PFAFLLTNSY LSGIHPALER AAATLGADWR QRFRHITFPL LLPGLMTTFC LTFVLAFAVF
PSAMMVGDPD GRTHVISVEA YETALEHFNY SEGSAIAMVM TALMLAVVGV AMGLRSRLYR
GSTGGKG
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