| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6869 |
|---|
| Symbol | |
|---|
| ID | 8338235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7935787 |
|---|
| End bp | 7937046 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644959958 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003117549 |
|---|
| Protein GI | 256395985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA TCTCCGGAAA CGGAAGCACT TCACATATTC CCGCTCCCTC GCGTCGCAAC
GTCCTGACCG CGTTCGCCGC GGCCGGCGCC GCCGCGCCGC TCCTGGCGGC CTGTTCCAGC
CCGAGCAGCC CGGGTGCCGG CACCACAGCC AAGGCACCGG CCTCGCTCGG CGGCACCCCT
TCGGCCCCGG TCACCCTCAA CATCCTGGAC GTGGCCGGCA ACCTGGCCCT GACCAAGCCG
ATGATCGAGG CTTTCAAGAC CGCGCACCCC GAGGTCGTCA GCCATCTCAC TTACAGCACC
GGAACCGCGC CCCAGCTCGC GTCGAAGGTT CAGGCGCAGC AGCAGGCCGG CAACGTGCAG
ATCCATCTGG TGCTCACCGG CACCGACGGC CTGGCCGCCG GCATCCAGAA CGGCCTGTGG
ACCGGCCTGA AGCCTTATTA CGACACGTTC TTCCCGGGCC TGATGACCGA CTACCAGCCG
GCCGCCGCCG CGATGACGTC GCTGGCGCAG GACCAGGGCA TCGAACTGAC CTGGTACCCC
TCGGGCCCGC TGCTGGAGTA CGACCCCGCG AAGGTTGCGA GCCCGCCCGC CACCACGGAC
GCCCTGCTGG ACTGGGCGAA GGCCAACTCC GGGAAGTTTC AGTACGCACG GCCCGCCAAC
TCCGGCCCCG GCCGCACCTT CCTGATGGGC CTGCCCTACC TGCTGGGCGA CTCCGACCCC
ACCGACCCGG TCAACGGGTG GTCCAGGACG TGGGCCTACC TGACGGAGTT GGGCAAGCAC
GTCGACTCCT ACCCGTCCGG GACGACCGCC GTGATGAAGA ACCTCGCGGC CGGCTCCGTC
CACCTGGTCG CCACCACGAC CGGCTGGTAC ATCAACCCTC GGGCCCTGGG CACCGTGCCG
CCCTCCATGA AGGTCGCCAA GTTCACGTCC TTTACCTGGG TGAGCGACGC CCACTACGGG
GTCGTGCCCA AGGGGGTGTC GGCCGACGTC CTGACCGCGG TCCTCCGCCT GCTCGCCTGG
ATGCTCACCC CCGAGCAGCA GGCCTTCGCC TACGACGCCG GCTACTTCTA CCCGGGCCCG
GCCGTCAAGA ACGTCCCGCT GAGCAAGGCC CCTGCCGACT CGCAGAAGGT CATCGCCCAG
TTCGGCGAGC CGCAGTTCGA CGCCTGGATG GACCAGTTCC CGATCAAGAA CTCGCTGCCG
GCCGCCACCC AGGTCACCGC CTTCGACCTG TGGGATCGGA AGATCGGCTC GACGAAGTGA
|
|---|
| Protein sequence | MPEISGNGST SHIPAPSRRN VLTAFAAAGA AAPLLAACSS PSSPGAGTTA KAPASLGGTP
SAPVTLNILD VAGNLALTKP MIEAFKTAHP EVVSHLTYST GTAPQLASKV QAQQQAGNVQ
IHLVLTGTDG LAAGIQNGLW TGLKPYYDTF FPGLMTDYQP AAAAMTSLAQ DQGIELTWYP
SGPLLEYDPA KVASPPATTD ALLDWAKANS GKFQYARPAN SGPGRTFLMG LPYLLGDSDP
TDPVNGWSRT WAYLTELGKH VDSYPSGTTA VMKNLAAGSV HLVATTTGWY INPRALGTVP
PSMKVAKFTS FTWVSDAHYG VVPKGVSADV LTAVLRLLAW MLTPEQQAFA YDAGYFYPGP
AVKNVPLSKA PADSQKVIAQ FGEPQFDAWM DQFPIKNSLP AATQVTAFDL WDRKIGSTK
|
|---|
| |