Gene Caci_6851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6851 
Symbol 
ID8338217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7914445 
End bp7915269 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID644959942 
Producthypothetical protein 
Protein accessionYP_003117533 
Protein GI256395969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000610958 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA CCCCCACCAG CGCCGCAGAT CGAATCACCG CGCGTGACGC CCACATGCTC 
CGGCTCATCG CCGAACACCG TGTCCTCACC AGCAGCCAGC TGACCACAGC GTTCTTCAAC
CACCCCAGCA AGGCCCGGCT TCGCATCGGC ATTCTGCGCG ACGCAGGGCT GATCGAGACC
TTTCGTCCCC CGGGCGGAAG GGCAGCACTC CACTGCGTCG CTACCGCGAA AGCACTGAAG
CTCCTGGGCG CTGATCGGTC TGCCATGCCT CCGGCGGGCA AGGCCCAAGC CGCCACTGCA
GCAGCCCTGC GGCCGGACCT CCGGCACCTC CGCGGCGTCA ACGAGTTCTT CTGTCAGCTC
ATCGCGTACA GCAGGCGCAC CCGCGGCGCT GCCCTGGAAG AGTGGCGTTC TGAGTGGTCG
ACCGCAGCCC TGTTCCCCGG ACGGGTACGA GCTGACGGCT TCGCACACTG GCGCGTCGGC
GAACAGTGGT GCGAGTTCTT CTTCGAATAC GACACCGGCA GCGAACCGCT TCACCGGCTC
GTCGCCAAGC TCGACGGCTA CGACGATCTG ATGCACACCG CAGACACCTG CTGCCCCGTG
CTCTTCTGGC TGCCCAGCGC CCGGAGGGAG CAGCATGTCC GTCAGTCCTT GAGGGCGGCG
GACGTCGAGG TCCCGTTCGC CACGGCTTCC GGCGACCCGG AACACAGCGA TGTCGCAGGG
CCCATTTGGC TTCCGTCATT CGCCGACCGT CGGCTCACGC TGGCTGAGCT CGGCGAAGCC
GCGTGCGCCC ATCTCGGTGT ATCCCATCAG CCGCACGCAC TCTGA
 
Protein sequence
MTTTPTSAAD RITARDAHML RLIAEHRVLT SSQLTTAFFN HPSKARLRIG ILRDAGLIET 
FRPPGGRAAL HCVATAKALK LLGADRSAMP PAGKAQAATA AALRPDLRHL RGVNEFFCQL
IAYSRRTRGA ALEEWRSEWS TAALFPGRVR ADGFAHWRVG EQWCEFFFEY DTGSEPLHRL
VAKLDGYDDL MHTADTCCPV LFWLPSARRE QHVRQSLRAA DVEVPFATAS GDPEHSDVAG
PIWLPSFADR RLTLAELGEA ACAHLGVSHQ PHAL