Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6844 |
Symbol | |
ID | 8338210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7901223 |
End bp | 7905629 |
Gene Length | 4407 bp |
Protein Length | 1468 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644959935 |
Product | Tetratricopeptide TPR_4 |
Protein accession | YP_003117526 |
Protein GI | 256395962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0351351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAA GCCATCTGGC CGCTGCTCTT GCCCGGGCTA TGGATGCCGC CGACTGGACA GTGGTGGCCT GGGTCAACGC CGAGCAGGAA GCGTCGGTCC CGGTGTTCTT CAGCTCGCTG GCCCACCGGC TGGGTGTCGC GGTCCCTGAC GAACCCGCCG CCTCGGCCCA GGCTGCACTG GATTGGCTGC GGGCCACGTC TGAACGCTGT CTACTCGTCT TCGACAACGC GGTCGATGCA CAAGCCATAC GCCCCTGGAT TCCAGCCACA GGTCACGTCG CCACTGTCCT CACCACCAAT GTGACCGACT TGGGCGCCCT GAGCACCGAA CCACCCATCG AGGTCGGCCC TTTCACGCTC AGCGAGGCGG TGTCCTACCT GGACCGGCGC ACCGGGCTCG GCACAGCGGG CGCCGCCGAC CTAGCTACGG ATCTGGGACT GCTGCCGGTG GCCCTCGCAC AGGCAGCGCC GGTGATCAGG CACGATGGCA TCTCCTACGA GCGGTATCGG GCGCGGTTGC GGAACGTCCA GATCGGAGAG TTACTCGGCC CGGTGCGGTC GGACACCTAC CCGTACGGAT TCGCTCAGGC GATTCTGCTT TCGGTCGGAC GAATCGAGGA ATCCGCCGCC GAGCGGGCTG GTGACCAGGC GATCCTCGAC CGGTTGTTAG CCGCCATGGC GCTGCTGCCG GGCGACGGGA TGCCTAGGGC ATTGCTCCAC GCCGCTGTCC AGGCCGCCGA GAATGACATC GCCGAGGACA CCGTCGACCG CATCCTCGGC GACATCGTCG AGAGCAGTCT TGGAGCCCGG ATCGGCTTCG AGGCGTTCGA CGTCCACATC CTGACTCAGA CGGTACTTTT GGACCGCGCA CGGAACCGAG GGGACCTCGA GCAGGCGCTC GCAGGTCTCG CTGGTGCGTT CGAGGCTACC GACGCCGACG AGCTCGGTTC CTGGGAGCAT CGGATCCAGA TCCAGTGGCG AGCTCGGGCG ATCGTCCGTC TCAAACCTCA CCTCGGTCTG CCGGACGAGC CCGAGACCAA CGCGCCCTCG TCCAAGACCG ATTCCGGGCT CGCCAACACC GACATCGCGA CGCGGCTGCT CAACCAACTC TCCCGCTGCA CGCACCTGCT CAACGAAGCC ACCGACTCGA CCACGGCGCA GGTCCACGGA CAGATCGCGG CCTCCGGACT GGCGGCGATC CTCGGTTCCG ACCATCTCGA CACTCTGACG GCCAAGGACC GTCTCGGGGC TGCCTACCTA GCCACCTTCC GGCTTCTGCA GGCAGGCACG CTGCTGGAAG AGGTCGTGGC GGCCCGGACT CGTCTCCTGG GACCGGACCA CCCGGACACC CTGTCGACGC GATCAAAACT CGCCTGGGTG GTCATGCGGT CTGGACGGAC CGACGATGCG ATCTCCATCC TCGCCGAGGC ACTCGAGACC AGTCGGCAGG TTCTCGGCGA CGAGCATGCC GACACGGTCG GGTTCAAAAG CCAACTGGCG GATTTCCAAA CTTACCGCAA CGACTTCGCG GCTGCGCTAA CTATGCATGA GGAATGCTAC GAGACACGAC GACGAGTCCT GGGTCCCAAC GACCGGCAGA CGATCAGCTC CCGCTTCTCG ATGCTGATCG CCCACCGAGG CCTCGGCCAC CACGCGGAGG CACTCGCGCT AGCGGAGGAA ATGGCCGCAA CCGCTCAGCG TGACCACAGC CAGGACATCT CGCAGATCGT CGCGATCACA AGCATGCTGG CCGCCCTCTA CCAGGACGAG GGCCGGGCGC CGGAAAGTGC GATCGCCTCC GAACGTGTCG TTGAACTAAG TAAAGCCGCA TTCGGCGAGC ACCATCAGCT CACGCTGAAC TACGTGCTTA TCCTTGCGGC CACCTACAGA GCCGCCGGCC GGCCCGACGA CGCCCTGCAG CTCTATGAAC GCACGCTGCC GATCGCGCAG GCGGCGCTTG GTGAAGACAG CGTCGTCGCT CTCAACTGTG TCGGCAGTCT AAGCGACATC TATCGCGAAC AGGGCCGGTT CCGGGAAGCA GTCGACTTGG CCGGTGTCGT TTTGGAAGAG CAGGAGCGTG GATTCGGCGA CGATCATCCG ATCACCCTCC ACGGCCGTGT CAAGTTCGCT ACCTCGCTCT TCGGCATCGG GCAGTTCGAT CAGGGGATCG CAGTGCTGGA GAAGGTGCTC GCAACGCGCC GGCGGATTCT CGGAGAGGAG CATGTCGACA CCCTCGAATG CCGTGAAAGC ATCGCAATCG CTCGACTCGC GCTCAACCAG AACCACGCTG CGGTCGCCCT TCTCTCCGAA CTGGCCGCCG ATCGCGAAAG CTTTCAAGGG AGAACCCACA ACGCGACGTT GACCACGCGC GGCAAGCTGG CCGAGGCCCT GGGGCGGCAT GGCCGTCCGA GCGAAGCGAT CGCAATGCTG GAAGAGATTG TCGCGACTCG ACGGCAGGTC CGCGGCGACG ACGACCTCTG GGTCCTCAGG GACCAGGCAC ACCTCGGCAA AGCGTACCTT GCGTTCGGGC GCACGATCGA GGCCGTTTCC ATCGGCGAAT ATGTCGTCGC CGAAACTGGC CGTCTCCGAG GTGAAAGCCA TATGGACACT CTCGACGCCG TGGCCGAACT TGCTGACACG TACGAGTCTG CGGGGCGCCG CCGGGAAGCG ATCCCACTGC GGGAGCGAGT GCTGACCGGA CGGGTCGAGC ACTTCGGCAG ACTTCACGAG AAGTCAGCCT CGGCTCGCCG GAGCTTGGCC GACGCGTACA TCAAAGCCGG CGACACGGAG CGAGGGCTGG CCCTGCATGT CCAAATCAAA ATGGAGACGG GCAGAAGCTT TGGCCACGAA TGGTCACGAG TCGCGGGAGC AGTCCTGGCC GAGGCATACC TCACCGCCGG CCGGATCGAT GAAGCAGTCA CGCTGATGAA GGAAGCCCTT GCGGCCTCTG TACAAACATT CGGGAAAGAT CATTACATCA CCACGCGCAT CCGCGAAGCG CTCACCGATC TCTACGGAAA GGCCGGGTTC ACGGCCCAAG CCGCAGCGAT GCTGGAAGCC AATTGGGAAC GCGAGCGAGG TTACCGCGAC CCCGAGGATC CGTACCTGCT GGGCTACCAA GCTCAACTTG CCGAAAGTTA TGCGGCGGCC GATCGCGCCA ACGAGGCGAT CAACATCTAC GAGAGCCTCA TCGCCGAGGT CAACGGACGT ACGGACCTGG CCGAGCAGCA GATCATCGCG ATGCGACTGC GCCGAGGCCT TGCCATGGCC TATGCCAGGG CGAGAAAGTA CGACGACGGC GTTCGAATGC TCGGCGACCT CGTGGCGGAG GCGGAACACT CCTTCGGGAC GACTCATGAG TGGACTCTCG GCTGGCGTTC GGAGTACGCC GAGGCGTTGG CGGGCACAGA GCGACTCAGC GAGGCCATCG AAATGTACGA AGCGCTGCGG TCCGACATAC GCCAGGGCTA CGGAGCGAAT CAACTGGCAG TCTCCGGGAC TGAGGCCGCT CTCGCTTTTG CTTACATCGC CGCCGGACGG ATCGACGACG GCCTGCGGCT CCTGGAGGCC ACCACCGATG CACTCGCCGC GGCGGAGGGA GCCGGACATC CGGAGGCCCT CAGCGCACGC AATCGGCTGG CCCAAGTCCT AGCGAAAATC GGCCGGACCG ACGATGCGAT CACACTGATC GAACAAGTCA TCGCGGCGAT GATCGCGAAC TTGGGACCGG AGCACCCCTA CGTCCTGCAG AGCCGCTACG AGCTGATCGG CATGTATCGC AGCGCCTCAC GGGCCGCCGA GTCACTGACC ATGCTCAGTA CCTTGGTAAC GGATGAACGC CAGATTCTGG GCGAAGGCCA CCCCACGGTC CTCGAGCACC GCGGCGAGCT TGCGAACGCG TATCGGGAAA GCGGGCAAGC CCTCGAAGCC GTCCGGCAAT ACCAAGTGCT GCTCAAGGAC GATGCACGCT ACGTGGGACC TCGCGGTGAG CTGATGATCA TCCACCGGGC GGGCCTGATA TGGTCCAGCG TAGATATCGG CCGGATCATG GAGGCCATTG CCATGTGCGA GCAGCTGATC CCCGACGTCG AAGCAAGCGG GGGGACGGAG AGCAATGCCG CCAAGTCTAT ACGCGAAGTG CGCGTTGACT TGGAGCGAAT GGTCACCGGA CTCCGGTCTG AAGCGGTCAA GCTAGCGAAA ACACAGGCCA CTGCAAAGCC CGACGCCTCG ACGTTGGCAC ATTATTTCAC CGAGAGCGAC GCCGCACTGC GTCAACAGGG TGCAGCGGTC GCAGCCCTCT GCGGCCGGTC GTCAACTGAA ATTGCGCCTC CGGCTGCAAC GAGCGCTAAG TGCGCCAGGT GCCAGATGAT CTACCTGAGA GTTCCCTCGG ATGACCGGCA CGAGTGA
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Protein sequence | MGKSHLAAAL ARAMDAADWT VVAWVNAEQE ASVPVFFSSL AHRLGVAVPD EPAASAQAAL DWLRATSERC LLVFDNAVDA QAIRPWIPAT GHVATVLTTN VTDLGALSTE PPIEVGPFTL SEAVSYLDRR TGLGTAGAAD LATDLGLLPV ALAQAAPVIR HDGISYERYR ARLRNVQIGE LLGPVRSDTY PYGFAQAILL SVGRIEESAA ERAGDQAILD RLLAAMALLP GDGMPRALLH AAVQAAENDI AEDTVDRILG DIVESSLGAR IGFEAFDVHI LTQTVLLDRA RNRGDLEQAL AGLAGAFEAT DADELGSWEH RIQIQWRARA IVRLKPHLGL PDEPETNAPS SKTDSGLANT DIATRLLNQL SRCTHLLNEA TDSTTAQVHG QIAASGLAAI LGSDHLDTLT AKDRLGAAYL ATFRLLQAGT LLEEVVAART RLLGPDHPDT LSTRSKLAWV VMRSGRTDDA ISILAEALET SRQVLGDEHA DTVGFKSQLA DFQTYRNDFA AALTMHEECY ETRRRVLGPN DRQTISSRFS MLIAHRGLGH HAEALALAEE MAATAQRDHS QDISQIVAIT SMLAALYQDE GRAPESAIAS ERVVELSKAA FGEHHQLTLN YVLILAATYR AAGRPDDALQ LYERTLPIAQ AALGEDSVVA LNCVGSLSDI YREQGRFREA VDLAGVVLEE QERGFGDDHP ITLHGRVKFA TSLFGIGQFD QGIAVLEKVL ATRRRILGEE HVDTLECRES IAIARLALNQ NHAAVALLSE LAADRESFQG RTHNATLTTR GKLAEALGRH GRPSEAIAML EEIVATRRQV RGDDDLWVLR DQAHLGKAYL AFGRTIEAVS IGEYVVAETG RLRGESHMDT LDAVAELADT YESAGRRREA IPLRERVLTG RVEHFGRLHE KSASARRSLA DAYIKAGDTE RGLALHVQIK METGRSFGHE WSRVAGAVLA EAYLTAGRID EAVTLMKEAL AASVQTFGKD HYITTRIREA LTDLYGKAGF TAQAAAMLEA NWERERGYRD PEDPYLLGYQ AQLAESYAAA DRANEAINIY ESLIAEVNGR TDLAEQQIIA MRLRRGLAMA YARARKYDDG VRMLGDLVAE AEHSFGTTHE WTLGWRSEYA EALAGTERLS EAIEMYEALR SDIRQGYGAN QLAVSGTEAA LAFAYIAAGR IDDGLRLLEA TTDALAAAEG AGHPEALSAR NRLAQVLAKI GRTDDAITLI EQVIAAMIAN LGPEHPYVLQ SRYELIGMYR SASRAAESLT MLSTLVTDER QILGEGHPTV LEHRGELANA YRESGQALEA VRQYQVLLKD DARYVGPRGE LMIIHRAGLI WSSVDIGRIM EAIAMCEQLI PDVEASGGTE SNAAKSIREV RVDLERMVTG LRSEAVKLAK TQATAKPDAS TLAHYFTESD AALRQQGAAV AALCGRSSTE IAPPAATSAK CARCQMIYLR VPSDDRHE
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