Gene Caci_6830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6830 
Symbol 
ID8338194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7886551 
End bp7888131 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content69% 
IMG OID644959919 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_003117512 
Protein GI256395948 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTG CATTGGCGCT GCTCACGCTG TTCTCGGCGT GGGCAGTGTC CTTTTCGCCG 
TTCTGGCTGT TCGCGCTGAT CCCCTTCGCG CTCCTGCTGG CGCTCGGGAT CTTCGACGTC
CTGCAGCGCC GGCGCTCGAT CCTGCGCAAC TTCCCGGTCT TGGGCCACGC GCGCTTCATG
GCGGAGTTCA TCCGCCCGGA GATCCAGCAG TACTTCGTCG AGACGAACAC CGACGGCCGT
CCCTTCGACC GCGACACCCG CTCGGTCGTC TACGAGCGAG CCAAGGGCAT CCACGGCGAC
CAGGCGTTCG GGACCGAGCT CGACGTCGAG GCGTCGGGCT ATGAGTTCCT GGAGCACTCG
ATGTCCCCGC TGCAACCGGT ACCGGAGCAA CCGCGGGTGC TCGTAGGAGG CCCGGATTGC
CGCCAGCCGT ATCACATGGC GCTGCTCAAC GTCTCGGCGA TGAGCTTCGG CGCGCTGTCC
GCGCACGCGA TCCTGGCGCT GAACAAGGGC GCCAAGGCAG GCGGGTTCGC GCACGACACC
GGCGAGGGCG GCATCTCGCC GTACCACCGC GAGGGCGGCG GCGACCTGGT CTGGGAGATC
GGGTCGGGGT ACTTCGGCGC CCGCACAAAA GACGGGGACT TCGATCCCGA CAAGTTCCGT
GACAAGGCCG CCGACCCGCA GATCAAGTGC GTCGAGCTGA AGCTGAGCCA GGGCGCGAAG
CCAGGGCTCG GCGGCGTGCT GCCCGGACCG AAGGTGACGC GCCAGATCGC CGAGATCCGC
GACGTCCCGG AGGGCATCAC GGTCATCAGC CCTTCGGCGC ACAAGGCCTT CAACACCCCG
CGCGAACTGG TGCTGTTCAT CGCGAAGATG CGCGAGCTGT CCGGCGGCAA GCCCACCGGC
TTCAAGCTCT GCGTGGGCTC GCGCCGCGAG TTTCTGGGCG TCTGCAAGGC GATGCTGGCC
GAGGGCGTGA CCCCGGACTT CATCGTGGTC GACGGCTCCG AGGGCGGGAC CGGCGCGGCA
CCGCTGGAGT TCGAGGACAA CGTCGGCACC CCGCTCACCC ACGGTCTGCT GACGGTCCAC
AACGCGCTGG TCGGCGTGGG ACTGCGAGAC CGGATCCGGA TCGGCGCCAG CGGCAAGATC
GCCCGCGGTA CAGACATCGT GAAGCGCATC GCACAAGGCG CCGACTACAC CAACGCCGCG
CGCGCCATGA TGATGGCCGT CGGCTGCATC CAGGCGCAGA AGTGCCACAC CAACCACTGC
CCGGTCGGCG TCGCGACCCA GGATCCGAAG CGCTACCGGG CTTTGGACGT GCCGGACAAG
GCGACGCGGG TCCAGCACTT CCAGGCCGCG ACGGTCGCCG AGGCGCAGCA ACTCATCGCC
GCGATGGGTC TGACCGGACC GCACGAGCTG CGGCCGGAGA TGGTGCACCG GCGCGTGAGC
CAGCGCAAGA CGAGCACCTA CGCCGAGCTC TACCACTACC TCCGCCCCGG CGAACTGCTC
GCCGAACCGG TGCAGGGGTG GGACGAGGAC TGGCGGGCTG CCGACCCCGA CACGTTCCGG
ATGGTGGCGG CTAAGGCCTG A
 
Protein sequence
MLPALALLTL FSAWAVSFSP FWLFALIPFA LLLALGIFDV LQRRRSILRN FPVLGHARFM 
AEFIRPEIQQ YFVETNTDGR PFDRDTRSVV YERAKGIHGD QAFGTELDVE ASGYEFLEHS
MSPLQPVPEQ PRVLVGGPDC RQPYHMALLN VSAMSFGALS AHAILALNKG AKAGGFAHDT
GEGGISPYHR EGGGDLVWEI GSGYFGARTK DGDFDPDKFR DKAADPQIKC VELKLSQGAK
PGLGGVLPGP KVTRQIAEIR DVPEGITVIS PSAHKAFNTP RELVLFIAKM RELSGGKPTG
FKLCVGSRRE FLGVCKAMLA EGVTPDFIVV DGSEGGTGAA PLEFEDNVGT PLTHGLLTVH
NALVGVGLRD RIRIGASGKI ARGTDIVKRI AQGADYTNAA RAMMMAVGCI QAQKCHTNHC
PVGVATQDPK RYRALDVPDK ATRVQHFQAA TVAEAQQLIA AMGLTGPHEL RPEMVHRRVS
QRKTSTYAEL YHYLRPGELL AEPVQGWDED WRAADPDTFR MVAAKA