Gene Caci_6825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6825 
Symbol 
ID8338189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7880450 
End bp7881343 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID644959914 
Productamidohydrolase 2 
Protein accessionYP_003117507 
Protein GI256395943 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACG CAGATACCGC CGAAGTCCGC CGCTTCTGGC AGTCGCTGGG CCTGCCGGGC 
CTGATCGACA TCCACACCCA CTTCATGCCG CACCGTCTCC TGGAGCGGAT CCAGGCGTAC
TTCGACGCCG CCGGGCCGCT GCTCGGCCGG GTGTGGCCGA TCAAGTACCG CCAGGACGAG
GAAGAGCGGC TGGAGATCCT GCGCGGCTTC GGTGTGCTCG CGTTCACCTC GCTGGCGTAT
CCGCACAAGG CGGGTATGGC CGAGAGCTTG AACGCGTGGA CCGCTGACTT CGCGGCGCGT
ACGCCCGACT GCCTGCACAG TGCGACGTTC TTCCCTGAGC CTGAAGCCGC CTCTTACGTC
CCGGCGGCTA TCGAGGCCGG TGCTCGGGTG TTCAAGGCGC ATGTTCAGGT CGGTGGCTAT
GACCCTGCCG ATCCGTTGCT GGATCCGGTG TGGGGTGCGC TCGCTGATGC GGGGGTGCCG
GTGATCGCGC ACTGCGGTTC GGGACCGGTC GGGACTCCGT ACACCGGTCC GGAGCCGATG
GCGCGGGTGC TGGCTGCGCA CCCGGCGTTG CGGCTGGTCG TGGCGCACTT CGGGCTGCCC
GAATATGTCG AGTTCCTGGA TCTGGCCGAC CGCTATGACG GCGTGCTGTT CGACACCACG
ATGGCTTTCA CCGACTTCTT CGGGCAGGTC GAGCTGTCGG ATCGGGATCG TAAGCGGATC
GCAGAGTGCG AAGAACGGAT CTTGTTCGGG AGCGACTTCC CGAACATCCC CTACTCCTAC
ACAGGGGCGC TGGAATCGTT GGCCCGCCTC GATTTCGGCG ACGACTGGCT CCGCGCCGTG
TGCCATGGGA ACGCGGCGCG GATCTTCGGC GTGGAGGGCC CTCAGGCTTC GTAG
 
Protein sequence
MPDADTAEVR RFWQSLGLPG LIDIHTHFMP HRLLERIQAY FDAAGPLLGR VWPIKYRQDE 
EERLEILRGF GVLAFTSLAY PHKAGMAESL NAWTADFAAR TPDCLHSATF FPEPEAASYV
PAAIEAGARV FKAHVQVGGY DPADPLLDPV WGALADAGVP VIAHCGSGPV GTPYTGPEPM
ARVLAAHPAL RLVVAHFGLP EYVEFLDLAD RYDGVLFDTT MAFTDFFGQV ELSDRDRKRI
AECEERILFG SDFPNIPYSY TGALESLARL DFGDDWLRAV CHGNAARIFG VEGPQAS