| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6821 |
|---|
| Symbol | |
|---|
| ID | 8338185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7875854 |
|---|
| End bp | 7876546 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644959910 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003117503 |
|---|
| Protein GI | 256395939 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCA TTGTTAACGG TGTCAACATG AGGCACGATG AACAGGTGAG CACGCCCAAG
ACCGCCTCCC GGACCCGCTA TCACCACGGC GATCTGCGCA ACGCGATGAT GGATTCGGCG
GTGGAACTGG CGCGGACCGG CGGGCCGGAG GCGGTGGTGC TGCGCGAGGT GGCGCGGCGC
GTCGGGGTCT CGGCGACCGC GGCCTACCGG CACTTCTCCG ATGCCGAGGC GCTGCTGGAA
GAGGTGAAGA GCACCTCGCT GGCGGTGCTG GCCGACGCCC TGGCGGTCGC CGTGGGCTCG
GTCCCCTCCG ACGGCGATCC CGGCGACGTC GCGGTGGCCC GGCTGCGCGC CGCGGCGAAC
GCCTACATCG ACTTCGCGAC CGGCCAGGCC GGGCTGTTCC TGACCGCCTT CTGCCGCACC
ACGGTGCCCG GCGAGCAGTA CCCCGGCGAG CCGTTCACCG ACACCGACGC CTTCCGGGCG
CTGGGCTACC TGCTGGACGA GGTGGTCGCG GCCGGCCGGA TGCCCGCCGA GCGCCGCCCC
GGCGCGGACA TCGCCGCCTG GTCGGCGGTG CACGGCTTCG CGACGCTGTC GGTCGGTGGT
CCGCTGGAGC GGCACCTGAC GGCCGAGGAG CAGGAGTTCG TCCGGCAGCG GACGGTGGAC
GTCGTGATCC GGGGTCTGAC GGGCGCCGAG TGA
|
|---|
| Protein sequence | MAVIVNGVNM RHDEQVSTPK TASRTRYHHG DLRNAMMDSA VELARTGGPE AVVLREVARR
VGVSATAAYR HFSDAEALLE EVKSTSLAVL ADALAVAVGS VPSDGDPGDV AVARLRAAAN
AYIDFATGQA GLFLTAFCRT TVPGEQYPGE PFTDTDAFRA LGYLLDEVVA AGRMPAERRP
GADIAAWSAV HGFATLSVGG PLERHLTAEE QEFVRQRTVD VVIRGLTGAE
|
|---|
| |