Gene Caci_6814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6814 
Symbol 
ID8338178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7868978 
End bp7870009 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID644959903 
Productglycosidase PH1107-related 
Protein accessionYP_003117496 
Protein GI256395932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2152] Predicted glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGA AGCGCCATCC CGCCAACCCC ATCCTGCGCC GCAACCCCGA CCAGCCGTGG 
GAGGCCGGCT CCGTGCTGAA CGGCACGGTC GTCCGAGGCG CGGACGGCGT CATCCACATG
CTGTACCGCG CGACCAACGG CGTGGAGTTC AGCACGGCGG GGGAGTACGT CTCCTCGATC
GGCATCGCCG ACAGCACCGA CGGGGTGCGC TTCATCCGCC GGCCCGAGCC GCTGATCGTC
GCGGACCAGC CGTACGAGCA CGGCCTGGGC TGCGAGGACC CGCGCGTGGT GTTCCTCGAC
GGCGAGTACT ACATCTACTA CACGGCCGTC GAGGGCGTCC CGCCGGACAT CAAGGTCCGC
ATCGCGCTGG CGACGACGCC GGACCTGCGC GCCGAGACGG TCGCCAAGCA CGGGATCGTC
GGGCCGCAGG GTGCGCCGTC GAAGGCTGCG ACGCTGTTCC CCGAGCCGGT CGGCGGGAAG
TACCTGTGGT TCTTCACCTG GTGCTCCGAC ACCCCCGGCG CGGCGATCCT GCACACCACT
TTCGACGACC TGGCGGCGGT GAAGAACCCG CCGCGGGGTC ACGTCGCCGC CGCCGTCGAC
GCCTACGACG ACACCGCGGT CCTGATCCCC GGCGACCGCG CCGAACTGGC CAAGAAGCGC
GTCCGCCGCG GCCCGGAACT CGGCGCCCCG CCGATCCGCA CCGACGCCGG CTGGCTGTTC
TTCTACTGCA ACTCCGACAG CGAGGAGGAG CCGGAGTGGC AGATCAGCGC CGCGCTCCTG
GACCTGGAAC GGCCGTGGCA GGTGATCGCG CGCACGCCCG CACCGCTGCT GACCCCGCAG
ACCGAGGTCG AGCTGACCGG CGTCGTGAAC CGCGTGACGT TCCCCTCGGG CGCGCTGGTC
ATCGATGAGA CAGTGCACTT GTATTACGGG AGCGGGGACC AGGGGATCTG TTTGGCGACG
TGCGAGCTCG ACGCGTTGCT GGAGCATCTG CAGTCGTTCC CGGTGAAGGA AGAAGGTCCC
TGCGTCGGGT GA
 
Protein sequence
MLMKRHPANP ILRRNPDQPW EAGSVLNGTV VRGADGVIHM LYRATNGVEF STAGEYVSSI 
GIADSTDGVR FIRRPEPLIV ADQPYEHGLG CEDPRVVFLD GEYYIYYTAV EGVPPDIKVR
IALATTPDLR AETVAKHGIV GPQGAPSKAA TLFPEPVGGK YLWFFTWCSD TPGAAILHTT
FDDLAAVKNP PRGHVAAAVD AYDDTAVLIP GDRAELAKKR VRRGPELGAP PIRTDAGWLF
FYCNSDSEEE PEWQISAALL DLERPWQVIA RTPAPLLTPQ TEVELTGVVN RVTFPSGALV
IDETVHLYYG SGDQGICLAT CELDALLEHL QSFPVKEEGP CVG