Gene Caci_6810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6810 
Symbol 
ID8338174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7864653 
End bp7865663 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID644959899 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_003117492 
Protein GI256395928 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCAGGGAGAA GCAGGGCGCG GCGCACACCC GCATCATGGG TGTCGGCGGC 
TACGTGCCCA GCCGCGTCGT CGACAACGAA GAGGTCTGCA CCTGGATCGA CTCCTCCGAC
GAGTGGATCC GGACGCGCTC GGGCATCTCC GAGCGCCGCT GGGCCACGCC GGAGGAGACG
GTCCTGGAGA TGGCGGTCGA GGCCTCCGGC AAGGCGCTGG CATCGGCCGG GATCGCCGGG
GACCAGATCG GCGCGATCAT CGTCGCCACG GTCTCGCACT TCCACCAGAC CCCCGCGCTG
GCCTGCCTGG TCGCCGACCG GCTCGGTACC AACGGCGCGG CCTTCGACAT CTCCGCCGGC
TGCGCGGGCT TCTGCTACGG CGTGGCTCAG GCCTCGGACA TGGTCAAGGC CGGCACCGCC
GAGTACGTCC TGGTGATCGG CGTGGAGCGG CTCAGCGACC TGACCGACAT CCACGACCGC
GGCACCGCCT TCATCTTCGG CGACGGCGCC GGCGCGGTGG TGATAGGCCC GTCCGACACC
CCCGGCATCG GCCCGGTGGT GTGGGGCTCC GAGGGCGACA AGTACGGCAC CATCACGCAG
ACCTACCCCT GGAACGAGGT TCCCGAGGAA GGCGAGGACG GCGCGGAGGT CCGCGGTCCG
TTCCTGCAGA TGGAGGGCCA GGCGGTCTTC CGCTGGGCCT CCTACCAGAT GGCCGAGGTC
TCGCTGAAGG CGCTGGCCGA GGCCGGCATC ACCGCCGGCG ACCTGGACGC CTTCATCCCG
CACCAGGCCA ACATGCGCAT CACCGACCGC CTGGTGAAGG TCCTGGACCT GCCCGAGCAC
GTGCCGGTCG CGCGGACCAT CTCCGAGTTC GGAAACAACT CCGCGGCCAC CATCCCGCTG
GCCATGGACC GCATGCTCTC CGACGGCACC GCGCCGCACG GCGGCCTGGC CCTGCTCATC
GGGTTCGGGG CGGGTCTGGT CTACGCGGCG CAGGTCGTTA GTCTCCCCTA G
 
Protein sequence
MATIREKQGA AHTRIMGVGG YVPSRVVDNE EVCTWIDSSD EWIRTRSGIS ERRWATPEET 
VLEMAVEASG KALASAGIAG DQIGAIIVAT VSHFHQTPAL ACLVADRLGT NGAAFDISAG
CAGFCYGVAQ ASDMVKAGTA EYVLVIGVER LSDLTDIHDR GTAFIFGDGA GAVVIGPSDT
PGIGPVVWGS EGDKYGTITQ TYPWNEVPEE GEDGAEVRGP FLQMEGQAVF RWASYQMAEV
SLKALAEAGI TAGDLDAFIP HQANMRITDR LVKVLDLPEH VPVARTISEF GNNSAATIPL
AMDRMLSDGT APHGGLALLI GFGAGLVYAA QVVSLP