Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6793 |
Symbol | |
ID | 8338157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7840239 |
End bp | 7841879 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644959882 |
Product | Amidohydrolase 3 |
Protein accession | YP_003117475 |
Protein GI | 256395911 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.548795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA TACCGGTGAT CCGCCACGCC GACCTGATCC TGCGCGGCGG GCGCGTCCAC ACCCTGGACG CCGCCGACAC GGTGGTGTCC TCGCTGGCCG TGGCCGGTGG ACGGATCGCG GCGGCCGGCG ACGACCGGGA GACCGCGGTG CTGCTCGGCC CGGACACCGA GGTGGTCGAT CTGGCCGGCC GCGTGGTGGT CCCCGGGCTG CACGACTCGC ACCTGCACCT GACCGACGCC GGCAACAGCT GGAACCTTCA GGTGCGCTGG GACGGCGTGC CGTCGCTGGC CGACGCGCTG AAGCTGCTCG CCCTGCGCGC CGCCGAAGCC GCGCCCGGGC AGTGGGTCCA GGTGATCGGC GGCTGGTCGG ACACCCAGTT CGCCGAGCAC CGGCTGCCCA CCCTGGCCGA GATCGAGTCG GTGTCGGCGG ACGTGCCGGT GCTGGTGGTC TTCCTGGACA CCGCGGCGTT CCTGAACGCG GCAGCGCTGC GGGCTCTGGG CTACGACCAG ACGACGCCGG ACCCGCCGGG CGGCGAGATC CAGCGCGACA CCGCCGGGAA CCCCACCGGC CTGCTGCTCT CCCGGCCGAG CCCGGCGGTC CTGGCGCTGG CCGTACTCGG CGCGCCGCAG CTGAAGCCGT CCGAGCAGGT GGGCTCCACC GACCGGTTCC TGCGCGAGCT GAGCCGGCGC GGCGTGACCG GCGCCATCGA CGCCGGGGCG ACCGGCATCC CGGGCTGCTA CGACGCGCTG CGGACGCTGC GTGCGCAGAA CCGGTTGCCG GTGCGGACGG CGCTGAACGT CATGGCTTCC CGGCCCGGCG AGGAGCGCGA GGAGCTGGCC ACCCTGCTGC GCGGCGTGAC CTTCCACGAC GACGACATGT TGTGGTTCAA CGGCATCGGC GAGGCACTCA CGCTGGACGG CGTGGACTTC TCCAACTTCG CGCAGCCGCG CCCCGCGCTG TCCGACGCCA TGGGACGCCA CCTGGAGCCA CTGGTCCGGC TGCTGGCGAG CAACCGCTGG CCGTTCAGCT TCCACGCGAC CTACGAGGAG TCGATCAGCC GCTTCCTCGG CGTGTTGGAG AAGGTGAACC GCGACGTCCC CTTCGACGGA CTGCGCTGGG CCGTGGAGCA CGCCGAGACG ATCCGTCCGC AGACCATCGA CCGGGTGGCG GCACTCGGCG GCGGCATCAC GGTGCAGCAC CGGATGGCCT ACCGGGGCGA GCAATTCCTG AAGCGCTACG GACCCGAGGC GGCCCGGCAC GTGCAGCCGG TGATGGAGAT GCTGACGCGC GGCGTGCCGG TCGGCGGCGG CACGGACGGC ACGTGGATGG CCGACGCCAA TCCCTGGGGC GCGCTGCGCT GGTTCACGAC CGGCACGACA CTCGGCGGCC TGGAGATGTG GCGCCCGGAG GACCGCCTGG ACCGCACCCT CGCGCTGCGG CTGTTCACCG GAGGGAGTGC TTGGTTCACC GGCGAGGCAC ACCAGCGCGG GGCGCTGGAG CCGGGGATGC TCGCGGACTT CGCGGTGCTG TCGGCGGACT ACTTCAGCGT GCCGGAGAAC GAGATCGCGG ATGTGGAGTC GGTGCTGACG GTGGTCGGCG GCGCGGTCGT GCACGCGGCG GGACCGTACG CGCGGCCGTG A
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Protein sequence | MSDIPVIRHA DLILRGGRVH TLDAADTVVS SLAVAGGRIA AAGDDRETAV LLGPDTEVVD LAGRVVVPGL HDSHLHLTDA GNSWNLQVRW DGVPSLADAL KLLALRAAEA APGQWVQVIG GWSDTQFAEH RLPTLAEIES VSADVPVLVV FLDTAAFLNA AALRALGYDQ TTPDPPGGEI QRDTAGNPTG LLLSRPSPAV LALAVLGAPQ LKPSEQVGST DRFLRELSRR GVTGAIDAGA TGIPGCYDAL RTLRAQNRLP VRTALNVMAS RPGEEREELA TLLRGVTFHD DDMLWFNGIG EALTLDGVDF SNFAQPRPAL SDAMGRHLEP LVRLLASNRW PFSFHATYEE SISRFLGVLE KVNRDVPFDG LRWAVEHAET IRPQTIDRVA ALGGGITVQH RMAYRGEQFL KRYGPEAARH VQPVMEMLTR GVPVGGGTDG TWMADANPWG ALRWFTTGTT LGGLEMWRPE DRLDRTLALR LFTGGSAWFT GEAHQRGALE PGMLADFAVL SADYFSVPEN EIADVESVLT VVGGAVVHAA GPYARP
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