Gene Caci_6793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6793 
Symbol 
ID8338157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7840239 
End bp7841879 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content73% 
IMG OID644959882 
ProductAmidohydrolase 3 
Protein accessionYP_003117475 
Protein GI256395911 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.548795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TACCGGTGAT CCGCCACGCC GACCTGATCC TGCGCGGCGG GCGCGTCCAC 
ACCCTGGACG CCGCCGACAC GGTGGTGTCC TCGCTGGCCG TGGCCGGTGG ACGGATCGCG
GCGGCCGGCG ACGACCGGGA GACCGCGGTG CTGCTCGGCC CGGACACCGA GGTGGTCGAT
CTGGCCGGCC GCGTGGTGGT CCCCGGGCTG CACGACTCGC ACCTGCACCT GACCGACGCC
GGCAACAGCT GGAACCTTCA GGTGCGCTGG GACGGCGTGC CGTCGCTGGC CGACGCGCTG
AAGCTGCTCG CCCTGCGCGC CGCCGAAGCC GCGCCCGGGC AGTGGGTCCA GGTGATCGGC
GGCTGGTCGG ACACCCAGTT CGCCGAGCAC CGGCTGCCCA CCCTGGCCGA GATCGAGTCG
GTGTCGGCGG ACGTGCCGGT GCTGGTGGTC TTCCTGGACA CCGCGGCGTT CCTGAACGCG
GCAGCGCTGC GGGCTCTGGG CTACGACCAG ACGACGCCGG ACCCGCCGGG CGGCGAGATC
CAGCGCGACA CCGCCGGGAA CCCCACCGGC CTGCTGCTCT CCCGGCCGAG CCCGGCGGTC
CTGGCGCTGG CCGTACTCGG CGCGCCGCAG CTGAAGCCGT CCGAGCAGGT GGGCTCCACC
GACCGGTTCC TGCGCGAGCT GAGCCGGCGC GGCGTGACCG GCGCCATCGA CGCCGGGGCG
ACCGGCATCC CGGGCTGCTA CGACGCGCTG CGGACGCTGC GTGCGCAGAA CCGGTTGCCG
GTGCGGACGG CGCTGAACGT CATGGCTTCC CGGCCCGGCG AGGAGCGCGA GGAGCTGGCC
ACCCTGCTGC GCGGCGTGAC CTTCCACGAC GACGACATGT TGTGGTTCAA CGGCATCGGC
GAGGCACTCA CGCTGGACGG CGTGGACTTC TCCAACTTCG CGCAGCCGCG CCCCGCGCTG
TCCGACGCCA TGGGACGCCA CCTGGAGCCA CTGGTCCGGC TGCTGGCGAG CAACCGCTGG
CCGTTCAGCT TCCACGCGAC CTACGAGGAG TCGATCAGCC GCTTCCTCGG CGTGTTGGAG
AAGGTGAACC GCGACGTCCC CTTCGACGGA CTGCGCTGGG CCGTGGAGCA CGCCGAGACG
ATCCGTCCGC AGACCATCGA CCGGGTGGCG GCACTCGGCG GCGGCATCAC GGTGCAGCAC
CGGATGGCCT ACCGGGGCGA GCAATTCCTG AAGCGCTACG GACCCGAGGC GGCCCGGCAC
GTGCAGCCGG TGATGGAGAT GCTGACGCGC GGCGTGCCGG TCGGCGGCGG CACGGACGGC
ACGTGGATGG CCGACGCCAA TCCCTGGGGC GCGCTGCGCT GGTTCACGAC CGGCACGACA
CTCGGCGGCC TGGAGATGTG GCGCCCGGAG GACCGCCTGG ACCGCACCCT CGCGCTGCGG
CTGTTCACCG GAGGGAGTGC TTGGTTCACC GGCGAGGCAC ACCAGCGCGG GGCGCTGGAG
CCGGGGATGC TCGCGGACTT CGCGGTGCTG TCGGCGGACT ACTTCAGCGT GCCGGAGAAC
GAGATCGCGG ATGTGGAGTC GGTGCTGACG GTGGTCGGCG GCGCGGTCGT GCACGCGGCG
GGACCGTACG CGCGGCCGTG A
 
Protein sequence
MSDIPVIRHA DLILRGGRVH TLDAADTVVS SLAVAGGRIA AAGDDRETAV LLGPDTEVVD 
LAGRVVVPGL HDSHLHLTDA GNSWNLQVRW DGVPSLADAL KLLALRAAEA APGQWVQVIG
GWSDTQFAEH RLPTLAEIES VSADVPVLVV FLDTAAFLNA AALRALGYDQ TTPDPPGGEI
QRDTAGNPTG LLLSRPSPAV LALAVLGAPQ LKPSEQVGST DRFLRELSRR GVTGAIDAGA
TGIPGCYDAL RTLRAQNRLP VRTALNVMAS RPGEEREELA TLLRGVTFHD DDMLWFNGIG
EALTLDGVDF SNFAQPRPAL SDAMGRHLEP LVRLLASNRW PFSFHATYEE SISRFLGVLE
KVNRDVPFDG LRWAVEHAET IRPQTIDRVA ALGGGITVQH RMAYRGEQFL KRYGPEAARH
VQPVMEMLTR GVPVGGGTDG TWMADANPWG ALRWFTTGTT LGGLEMWRPE DRLDRTLALR
LFTGGSAWFT GEAHQRGALE PGMLADFAVL SADYFSVPEN EIADVESVLT VVGGAVVHAA
GPYARP