Gene Caci_6789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6789 
Symbol 
ID8338153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7835372 
End bp7836022 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID644959879 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_003117472 
Protein GI256395908 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.160019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCA TCTCCGCGCC GCTGAGGCGG CACCTGGCGG CGGTCCGCGC GATGGTGGTG 
TTCACCGTCA TCCTGGGCAT CGCCTACCCT CTGCTGGTCA CCGGGATCGC GCAGCTCGCC
TTCAAGGACA AGGCGAACGG CTCGCTCATC AAGAACGCCT CCGGCCAGAT CGTCGCCTCC
TCCCTGCTGT GCCAGCAGTA CGTCGACAAG TCCGGCACCG CCCTCCCGCA GTACTTCCAG
ACCCGGCCCT CCGACGCCAC CGACTCCGCC AACCCCACCG ACCCCGGCTG CGACTACAGC
TACTCCGCCG GATCCAACCT CGGCACCGGC AGCGCCACGC TGAAGCACAC CATCGAGGGC
CGCATCGCCT CCTACGCCAA GGCATACGAC ATCGACCCCG CCAAGGTCCC CGAGGACGCC
GTCACGGCAT CCGCCTCCGG CATGGACCCC GGCATCTCGG TGCAGAACGC CGACGACCAA
GCCGCCTCGG TCGCCAAGGC GCGCGGCGTC GACGTGGCGA CGGTGGACCA GTTGGTCAAG
GACAACACCA CCGGCCGCTC CCTGGGCTTC CTGGGCGAGG AGTACGTGAA CGTGGTGACG
CTGAACCTGG CGCTGGACAA GGAGCATCCG GTCGCGGCGG CTAAGAGCTG A
 
Protein sequence
MSRISAPLRR HLAAVRAMVV FTVILGIAYP LLVTGIAQLA FKDKANGSLI KNASGQIVAS 
SLLCQQYVDK SGTALPQYFQ TRPSDATDSA NPTDPGCDYS YSAGSNLGTG SATLKHTIEG
RIASYAKAYD IDPAKVPEDA VTASASGMDP GISVQNADDQ AASVAKARGV DVATVDQLVK
DNTTGRSLGF LGEEYVNVVT LNLALDKEHP VAAAKS