| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6784 |
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| Symbol | |
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| ID | 8338148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7830989 |
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| End bp | 7832455 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959874 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_003117467 |
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| Protein GI | 256395903 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.429215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG GGCAGACGTC GTCTCAGGGT TCGATGTCAG CCCGCGGGCC CGGCGCGAGG
CCGCGCTCGG TCGCCGTGAT CGGCGCGGGC GTCTCGGGTC TGGCGGCGGC GTGGTACGTC
AAGCAGGCGC TGCCGGACGC GACCGTCACC GTCTTCGAAG GCTCGCCCCG CCTCGGCGGC
AAGCTGGCGC TCGGCGAGGT CGGCGGCGTC CAGGTGGACC TCGGCGCCGA GTCGATCCTG
AACCGCCGTC CGGAGGCCGT GGATCTGGCG CGGGCCGTCG GATTGGCCGA CGACATCGTG
CATCCGGCGA CGGCATCGGC GTCGGTGTGG AGCCGCGGCG AACTGGTCCC GATGCCCAAG
GGACATCTGA TGGGCGTCCC CGGAGATCCG GGCGTCCTGG CCGGTCTGCT CTCGCCAGCC
GGACTCAGGC GCGCCGAGGC GGGACCGGCG CTGCCGTCCC GATCGGTACT GCGCGTGCAG
GCCGAGACCG ACGACATCGC GGTCGGCGCC TACGTGGCGG AGACCTTCGG CCGCGAGGTC
GTGGACCGGC TCGTCGAGCC GCTGCTCGGC GGCGTCTACG CCGGGCACGC CGACGAAATC
TCTTTGCGCG CCGCGGTTCC AGCGCTTGTC CCTGCCTACG AGTCGGGCGA GCCGCTGGAC
GAAGCGGTGT CCAAGATCCT CGCGGCGCAG TCCGCGGCGG CCAACCCCAA GCCGGTGTTC
GCGGGCGTCC GCGGCGGCGT GGGACGGTTC CCGGCGGCGC TGACAGAGTC CTGCGAAAGC
GCGGGCGTCA CCATCCGGCG CGAGACGATG GTCAGGGGAC TGACACGCAC GGCCGACGGC
TGGCGGCTGG TGTCGGGTCC GGTGCCCGCG CCGAGCGCGC ACGAGGCGGA CGCGGTCATC
GTGGCGGTTC CCGGCGCTCC GGCTTCGCGT CTGCTGAAGG ACGTCGCTCC GGTCGCGGCG
GCAGATCTCG CAGGGATCGA ATACGCCTCG GTCGCGCTGG CGACGTTCGT GTTCGACGAC
GCCTCGCTCC CCGCCGGCAG CGGCTTCCTC GTCCCGCCGG CGGACGGCCG GTTCATCAAG
GCTTCGACGT TCTCCAGCGT GAAGTGGTCC TGGCTCGCCG AGTCCGGCAA GACGGTGGTC
CGCGCCTCCG TCGGGCGGCA TCGCGAGACC GCAGACCTGC ACCAGGAGGA CGCCGATCTG
GCGGCTTCGG CACTGGCCGA TCTGCGTATC GCGCTCGGTG CGCCGGACGC GCTCGGGGAG
CCCGTCGACT GGCACGTGCA GCGCTGGGGC GGCGGGCTGC CGCAGTACGC GGTCGGGCAC
GTGGCGCGCG TGGAGCGGAT CCGCTCGGCG GTGGCGGCGC AGCCGGGACT CGCGGTCTGC
GGGGCGGCTT ACGACGGCGT CGGGATCGCG GCGTGCGTCG CCTCGGCGCT GCGAGCCGCT
CGCGAAATCA GTGCCGGGCC CGCATAG
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| Protein sequence | MSAGQTSSQG SMSARGPGAR PRSVAVIGAG VSGLAAAWYV KQALPDATVT VFEGSPRLGG
KLALGEVGGV QVDLGAESIL NRRPEAVDLA RAVGLADDIV HPATASASVW SRGELVPMPK
GHLMGVPGDP GVLAGLLSPA GLRRAEAGPA LPSRSVLRVQ AETDDIAVGA YVAETFGREV
VDRLVEPLLG GVYAGHADEI SLRAAVPALV PAYESGEPLD EAVSKILAAQ SAAANPKPVF
AGVRGGVGRF PAALTESCES AGVTIRRETM VRGLTRTADG WRLVSGPVPA PSAHEADAVI
VAVPGAPASR LLKDVAPVAA ADLAGIEYAS VALATFVFDD ASLPAGSGFL VPPADGRFIK
ASTFSSVKWS WLAESGKTVV RASVGRHRET ADLHQEDADL AASALADLRI ALGAPDALGE
PVDWHVQRWG GGLPQYAVGH VARVERIRSA VAAQPGLAVC GAAYDGVGIA ACVASALRAA
REISAGPA
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