Gene Caci_6783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6783 
Symbol 
ID8338147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7829729 
End bp7830934 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID644959873 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_003117466 
Protein GI256395902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.894439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACA GTGTGACCGA GAGCCTGAAC CCCGCGGCGG ACCTGGACCA GTCGGCAGCC 
GAGAAGTCCA CTGACGTGCC GGGCCCGCGC AGCGGGAGCG CGCCGGGCTC CTCGAGGGCT
TCCGGCGCTT TGGGCGCCTC CGATGCTTCA GGCGCCTCGG ACCCGCGCCG CAGCCCCGCC
CACGACAGCG ACTTCCTGCG CGCCGCCCGC CGCGAGCCGG TCAGCCGCAC CCCGGTGTGG
TTCATGCGCC AGGCCGGCCG TGCGCTGCCG GAGTACAAGA AGGTGCGTAC CGGGATCCCG
ATGCTGGACG CCTGCCTGCG CCCGGACCTG GTGACCGAGA TCACCCTGCA GCCGGTGCGC
CGCTACGGCG TGGACGCCGC CGTCCTCTAC AGCGACATCG TGGTCCCGCT CAAGGCGATC
GGCGTGGAGG TGGAGATCGT CCCGAACGTC GGCCCGGTGA TCGCCCACCC GGTCCGCGAC
CTGTCGGGGC TGGACCAGAT CCGGCCGCTG GACCCGGCCA CGGACCTGGC CTTCGCCACC
GAGGCGGTGC GGCAGCTGGT CGGCGAGCTG GGCTCCACCC CGCTGATCGG CTTCGGCGGC
GCCCCGTTCA CGGTCGCCAG CTACCTTATC GAGGGCGGGC CGTCGAAGAA CCATGAGAAG
ACCAAGGCGA TGATGCTCGG CGCGCCGGAG CTGTTCGCCG CGCTGATGGA CCGCCTGGCC
GACCTGACCG CCGGCTTCAT GCGGGTGCAG GTCGAGGCCG GCGCGAGCGT GGTGCAGCTG
TTCGACTCCT GGGCCGGCGC GCTGTCCCCC CGGGACTACG AGCGCTACGT CATGCCGCAC
AGCGCCAAGG TGCTGGACTC GCTGGCGGAC CTGGGCGTGC CGCGCATCCA CTTCGGCGTC
GGCACCGGCG AGCTGCTGCC GCTGATGGCC GCCGCGGGCG CGGACGTGGT CGGCGTGGAC
TGGCGGGTCC CGCTGGACGA GGCCTCGCGC CGCATCGGTC CGGACTACGC GGTGCAGGGC
AACCTGGACC CGTCGGTGAT GTTCGCGCCG TGGCCGGTCA TCGAGACCCG GGTGCGCGAG
GTCCTCGACG AGGGCTCGCG GACCCCGGGA CACATCTTCA ACCTGGGCCA CGGCGTGACG
CCGGACATGG ACCCGGACCG GCTGGCCAGG GTCGTCGAGC TGGTGCACGA GGCGTCGGCG
CGCTAG
 
Protein sequence
MHDSVTESLN PAADLDQSAA EKSTDVPGPR SGSAPGSSRA SGALGASDAS GASDPRRSPA 
HDSDFLRAAR REPVSRTPVW FMRQAGRALP EYKKVRTGIP MLDACLRPDL VTEITLQPVR
RYGVDAAVLY SDIVVPLKAI GVEVEIVPNV GPVIAHPVRD LSGLDQIRPL DPATDLAFAT
EAVRQLVGEL GSTPLIGFGG APFTVASYLI EGGPSKNHEK TKAMMLGAPE LFAALMDRLA
DLTAGFMRVQ VEAGASVVQL FDSWAGALSP RDYERYVMPH SAKVLDSLAD LGVPRIHFGV
GTGELLPLMA AAGADVVGVD WRVPLDEASR RIGPDYAVQG NLDPSVMFAP WPVIETRVRE
VLDEGSRTPG HIFNLGHGVT PDMDPDRLAR VVELVHEASA R