| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6768 |
|---|
| Symbol | |
|---|
| ID | 8338132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7811088 |
|---|
| End bp | 7812266 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959861 |
|---|
| Product | sodium/calcium exchanger membrane region |
|---|
| Protein accession | YP_003117454 |
|---|
| Protein GI | 256395890 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0387] Ca2+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.449933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.231095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CAGCCGAGCA GCGCCTTCCC GCCTGGGCCG TGTGGTCCAA CGCCGTCCCG
GTGCTGGCCG GCGTGCTGCT GGCGTTCACG TGGGGGCGCG ACATGCCGCC GTGGGTGGTG
GCGGTCATCG CGGCGCTGCT GTTCGGTGCG GTGCTGGCGG CGGTGCACCA CGCGGAGGTG
GTGGCGCACC GGGTCGGGGA GCCCTTCGGC TCGCTGGTGC TGGCGGTCGC GGTGACGGTC
ATCGAGGTGG CGCTGATCAT CACCATGATG TCGGCGAAGG GCGCCAAGGG CGCGGGACTG
GCCCGGGACA CGGTGTTCGC GGCGGTGATG ATCACCTGCA ACGGCATCGC GGGCCTGTGC
CTGCTGCTCG GGGCGCTCAA GCGCGGGCTC GCGCTGTTCA ACGCCGACGG GACCTCGACG
GTGTTCGGCG CGATCATCAC CCTGGCCGGG CTGACGCTGG TGCTGCCGAC GTTCACCACC
TCGCAGCCCG GTCCGGAGTT CAACGACACG CAGCTGACGT TCGCGGCGCT GGCTTCGATC
GCGGTGTACG GGCTGTTCAT CAGCGCCCTG ACGGTGCGGC ATCGGCCCGA CTATCTGCCG
GTCGGCAGGG ATGGCGGCGG AGCTGGCTCT GGCTCTGACA GCGATGCAGG CTTTGAGAGT
GACACCGGTT TCGAGAACGA CACCGGCTTC GACGAGGACG GCTATGAAGG CGAGCGCCCG
ACCGCGCGCC AAGCCCTGAT CAGCCTGGGC CTGCTCGTGC TCGCCCTGGT CGCGGTGGTC
GGCCTGGGCA AGGGCGTGTC GCCGACCATC GAGCGCGGCG TGGACCGGGC CGGGCTGCCG
GCCTCGGTGG TCGGCGTCGT GATCGCGCTG ATGGTGCTGC TGCCGGAGGC GATCGCGGCG
GTGCGGGCGG CGCAGCGGGA CGAGGTGCAG ACCAGCTTGA ACCTGGCGCT GGGGTCGGCG
ATGGCGAGCA TCGGGCTGAC GATCCCGGCG ATCGCCGTGG CGACCGTGTG GCTGTCCACG
CCGCTGCTGC TGGGCCTGGA CGCCAGCCAC ATGGTGTTGC TGGCGATGAC CGTCGCGGTC
GGGACGCTGA CGTTCGTGCG CGGCCGGGCG ACGCTGGTTC AGGGCGGCGC ACACCTGGTG
CTGTGCGCCG GATATCTGGT CCTCGCGGTC AGTCCCTAG
|
|---|
| Protein sequence | MSTSAEQRLP AWAVWSNAVP VLAGVLLAFT WGRDMPPWVV AVIAALLFGA VLAAVHHAEV
VAHRVGEPFG SLVLAVAVTV IEVALIITMM SAKGAKGAGL ARDTVFAAVM ITCNGIAGLC
LLLGALKRGL ALFNADGTST VFGAIITLAG LTLVLPTFTT SQPGPEFNDT QLTFAALASI
AVYGLFISAL TVRHRPDYLP VGRDGGGAGS GSDSDAGFES DTGFENDTGF DEDGYEGERP
TARQALISLG LLVLALVAVV GLGKGVSPTI ERGVDRAGLP ASVVGVVIAL MVLLPEAIAA
VRAAQRDEVQ TSLNLALGSA MASIGLTIPA IAVATVWLST PLLLGLDASH MVLLAMTVAV
GTLTFVRGRA TLVQGGAHLV LCAGYLVLAV SP
|
|---|
| |