Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6767 |
Symbol | |
ID | 8338131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7809163 |
End bp | 7810932 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959860 |
Product | ABC transporter related |
Protein accession | YP_003117453 |
Protein GI | 256395889 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.406129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.504103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTGC CATCCGCCGA TCCCCTCGAC CACCACTACC GCGGCGAGCA CCCGATCCGC ACGCTCGCCT ACCTCTTCCG GGAGGACCGA GGCCGGCTGG CTCTCGGCGT CCTGGCCTAT TTCGTCAAGC ACAGCCCCAC TTTTCTGCTT CCGTTGGTGA CGGCGGACGT CATCGACATC GTGGTCAAAC ACCGCCCGAT ATCCGGCCTC TGGATCGATT CGGGCATTCT TCTCGTCCTT CTCCTGTTCA ACCTTCCGGG ACATCTTCTG TACGTCCGCT GCTTCAGCCA CTCGATCCGG CGGATGGGCG TCCGACTCCG CTCGGCGCTG GTCTGGCGGC TGCAACACCT CACCATCGGC TACCACGCGC GGGTCAGCGC CGGTGTGTTG CAGGCCAAGG TGATCCGGGA CGTCGAGGCC ATCGAGCAGG CCGCGCAGCA GACCTCCGAC ACCGGCATCG GCGCGCTGGT GACGATGGTC GGCGCGACGG TCATCATCGC CTTCCGCGAC CCGGTCTGGC TGCCGGTGTT CGCCGCTCTG GTGCCGGTGA CGGTGCTGCT GGCGATGGCG CTGCGCAAGC CGATGAAACA GGACAATGAG TCCTTCCGTG CGGAAGTGGA GCATTTGTCG TCAAGGGTCG TCGAGATGAC GAATCTGATC CCCATCACCC GCGCGCACGG TCTGGAGCGC GACGCCTACA AGCGGGTCGA CGGCACGCTG CGCCGTGTGC TGGCCGCCGG GCTGCGTCTG GACCTCATCA ACGGCACGTT CGGCGCGATG GCGTGGATCG CGTTGAACTT CATGGGCGTC GCGTGCCTGA CGGGAGCCGC CTGGGCCGCG TACACCGGAG CGCTGGGCAC CTCCCCCGGC GACGTGGTGA TGCTCAGCGC GTTCTTCACG ACACTGGTCG GCTCGGTGAC CGCGCTGATG AACCTGACGC CGGTCATCAC CCGGGGGCTC GCCTCGGTGC GCTCGGTCGG CGAAGTCCTT CAGGCGCCGG ACATCGAGGA GAACGAGGGC CGCGAGGCCG TCGAGGCGGT GCGCGGCGAA TTCCAGTTCG AGGGCTTGCG GTTCGAGTAC CCGGACGCCG ACCGGCCCTC GGTCGCGGAC TTCGATCTGG TGGTCCGGCC CGGGGAGACC GTCGCCTTCG TGGGAGCCTC CGGGGCGGGC AAGTCCACGG TGCTGAACCT GGTCATCGGC TTCATCCGGC CGACCGCCGG GCACATCCTG CTGGACGGCC GCGACATGGC CGGGCTGGAC CTGCGGACGT ACCGCAAGCA CCTGTCGATC GTGCCGCAGG AGACGACGCT GTTCGACGGG ACGATCCGGG ACAACGTGCT CTACGGCCTG ACCGGCGTGG ACGACGAGGA GCTGCGCACG GCGCTGCGCG ACGCGAACGC GCTGGAGTTC GTCGATCGGC TGCCCGAGGG TCTGGACACC CGGGTCGGGG AGAAGGGCGC GCGGATGTCC GGCGGGCAGA AGCAGCGGCT GGCGATCGCG CGGGCGTTGG TGCGCGATCC CAGGGTCCTG ATTCTCGACG AGGCCACCTC GGCGCTGGAC ACCCAGTCCG AGCGGCTGAT CCAGGAGGCG CTGGGCCGGC TGGTCAGCGG ACGCACGACG TTCGTCGTGG CGCACCGGCT GTCCACGGTG CGCAACGCCG ACCGGATCGT GGTGATGGAG GGCGGCCGGA TCGTGGAGAC GGGGACGCAC GAGGAGTTGG TGGCGCGGGA CGGGGCTTAT GCCGCGCTGC ACGGTGTGCG GGCTTCGTAG
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Protein sequence | MALPSADPLD HHYRGEHPIR TLAYLFREDR GRLALGVLAY FVKHSPTFLL PLVTADVIDI VVKHRPISGL WIDSGILLVL LLFNLPGHLL YVRCFSHSIR RMGVRLRSAL VWRLQHLTIG YHARVSAGVL QAKVIRDVEA IEQAAQQTSD TGIGALVTMV GATVIIAFRD PVWLPVFAAL VPVTVLLAMA LRKPMKQDNE SFRAEVEHLS SRVVEMTNLI PITRAHGLER DAYKRVDGTL RRVLAAGLRL DLINGTFGAM AWIALNFMGV ACLTGAAWAA YTGALGTSPG DVVMLSAFFT TLVGSVTALM NLTPVITRGL ASVRSVGEVL QAPDIEENEG REAVEAVRGE FQFEGLRFEY PDADRPSVAD FDLVVRPGET VAFVGASGAG KSTVLNLVIG FIRPTAGHIL LDGRDMAGLD LRTYRKHLSI VPQETTLFDG TIRDNVLYGL TGVDDEELRT ALRDANALEF VDRLPEGLDT RVGEKGARMS GGQKQRLAIA RALVRDPRVL ILDEATSALD TQSERLIQEA LGRLVSGRTT FVVAHRLSTV RNADRIVVME GGRIVETGTH EELVARDGAY AALHGVRAS
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