Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6764 |
Symbol | |
ID | 8338128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7805846 |
End bp | 7807096 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959857 |
Product | M6 family metalloprotease domain protein |
Protein accession | YP_003117450 |
Protein GI | 256395886 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGC TCCCCCGCCG GTTCGGCTCC CGGCGAGCGC TCCGCCTGGC CGGCCTGACC AGGGTGACCA GGGTGACCAG GGTGACCCGC CTGGCCTGCG CGATAGCACT GGTGAGCACC CTCGTGCCGC TGCTCGGCGC CGGACCGGTC CAGGCCGACA AGCGCGCCCC GAGCACGCAG TGCGCGCTGC CGAACCCCAG CGGCTGGACC GGCGAGGGCG AGACCACCGA CTACCACCAG TTCGAACGGC CACAGGGCAC GAAGAAGGCC GCGATGCTGT TCGTCGACTT CCCCGACGCG CCGGCCATGG ACTCCACGGA CGCCTACTAC AAGTTCCTGG CTCCGGCGCA CGACCTGATG ACGCAGTTCT CCGCCGGCGC CGTGGACCTG AGCATCACCC CGGTGAGGCA CTGGCTGCAC ATGCCGCAGG ACTCGGCGTC CTACGACTTC GAGCGCGGGA TCAGCTGGCC GCAGCAGGCG CTGTACGTCA AGCAGGCCGG GGAGTTGGCG GCGCAGTACG TGGACCTGTC GAAGTTCGAC CTCATCTACA TCGTCCCGCC GAAGAACGCC ACGGCGATCA CCTTCTCCCC CGCCTACGTC TTCGACCCGA AGCAGCCGAA CCTGATCGTG CACGGCAAAG AGGTGAAGTG GGGCGTCACC CTCGGGCAGG ACATGTACGT CTGGGGACCG AAGGTCCTGG TGCACGAGAC CAGCCACACC TTCGGGCTGC CCGACCTGTA CTCGTTCACC GACTCCGACG TGCACCACTG GGTCGGCGGG TTCGACGTCA TGGGCAACAT CATCGGCGAC GCGCCGCACC ACTTCGGGTG GGAGGACTGG AAGATCGGCT GGCTCGCCAA CTCCCAGGTC GCGTGCCTGG ACGCGCCGGG GACGTTCGCG GTGCGGCTGA AGCAGGTCGA GTCCCTCGGC GGGACGAAGA TCGCGGTGGT GCGGACCGGG CAGACGACGG CGGTCGTCGC GGAGTCGCGC CGCCCTTACG GCGTCGACAA AGGGCTCTGC AAGAGCGGGG TCGTGATCTA CAAGGTGAAC TCCGCGACCA TCAGCGGCAG CGGCCCGATC CGGGTGCAGA ACTCCTCGCC GCACACCCCG ACGACGACCG CCTGCAACGA GGCCGTGGAC TGGGGCGCCT ACGAGCCCGG CCAGACGTTC CACGACACCG CCGCCGGGGT GACGATCACG GTGAACTCGG CATCCACCAC CAGTGACGTG GTGACCGTCA CCAAAACCTG A
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Protein sequence | MRTLPRRFGS RRALRLAGLT RVTRVTRVTR LACAIALVST LVPLLGAGPV QADKRAPSTQ CALPNPSGWT GEGETTDYHQ FERPQGTKKA AMLFVDFPDA PAMDSTDAYY KFLAPAHDLM TQFSAGAVDL SITPVRHWLH MPQDSASYDF ERGISWPQQA LYVKQAGELA AQYVDLSKFD LIYIVPPKNA TAITFSPAYV FDPKQPNLIV HGKEVKWGVT LGQDMYVWGP KVLVHETSHT FGLPDLYSFT DSDVHHWVGG FDVMGNIIGD APHHFGWEDW KIGWLANSQV ACLDAPGTFA VRLKQVESLG GTKIAVVRTG QTTAVVAESR RPYGVDKGLC KSGVVIYKVN SATISGSGPI RVQNSSPHTP TTTACNEAVD WGAYEPGQTF HDTAAGVTIT VNSASTTSDV VTVTKT
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