Gene Caci_6764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6764 
Symbol 
ID8338128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7805846 
End bp7807096 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content69% 
IMG OID644959857 
ProductM6 family metalloprotease domain protein 
Protein accessionYP_003117450 
Protein GI256395886 
COG category 
COG ID 
TIGRFAM ID[TIGR03296] M6 family metalloprotease domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCCCCCGCCG GTTCGGCTCC CGGCGAGCGC TCCGCCTGGC CGGCCTGACC 
AGGGTGACCA GGGTGACCAG GGTGACCCGC CTGGCCTGCG CGATAGCACT GGTGAGCACC
CTCGTGCCGC TGCTCGGCGC CGGACCGGTC CAGGCCGACA AGCGCGCCCC GAGCACGCAG
TGCGCGCTGC CGAACCCCAG CGGCTGGACC GGCGAGGGCG AGACCACCGA CTACCACCAG
TTCGAACGGC CACAGGGCAC GAAGAAGGCC GCGATGCTGT TCGTCGACTT CCCCGACGCG
CCGGCCATGG ACTCCACGGA CGCCTACTAC AAGTTCCTGG CTCCGGCGCA CGACCTGATG
ACGCAGTTCT CCGCCGGCGC CGTGGACCTG AGCATCACCC CGGTGAGGCA CTGGCTGCAC
ATGCCGCAGG ACTCGGCGTC CTACGACTTC GAGCGCGGGA TCAGCTGGCC GCAGCAGGCG
CTGTACGTCA AGCAGGCCGG GGAGTTGGCG GCGCAGTACG TGGACCTGTC GAAGTTCGAC
CTCATCTACA TCGTCCCGCC GAAGAACGCC ACGGCGATCA CCTTCTCCCC CGCCTACGTC
TTCGACCCGA AGCAGCCGAA CCTGATCGTG CACGGCAAAG AGGTGAAGTG GGGCGTCACC
CTCGGGCAGG ACATGTACGT CTGGGGACCG AAGGTCCTGG TGCACGAGAC CAGCCACACC
TTCGGGCTGC CCGACCTGTA CTCGTTCACC GACTCCGACG TGCACCACTG GGTCGGCGGG
TTCGACGTCA TGGGCAACAT CATCGGCGAC GCGCCGCACC ACTTCGGGTG GGAGGACTGG
AAGATCGGCT GGCTCGCCAA CTCCCAGGTC GCGTGCCTGG ACGCGCCGGG GACGTTCGCG
GTGCGGCTGA AGCAGGTCGA GTCCCTCGGC GGGACGAAGA TCGCGGTGGT GCGGACCGGG
CAGACGACGG CGGTCGTCGC GGAGTCGCGC CGCCCTTACG GCGTCGACAA AGGGCTCTGC
AAGAGCGGGG TCGTGATCTA CAAGGTGAAC TCCGCGACCA TCAGCGGCAG CGGCCCGATC
CGGGTGCAGA ACTCCTCGCC GCACACCCCG ACGACGACCG CCTGCAACGA GGCCGTGGAC
TGGGGCGCCT ACGAGCCCGG CCAGACGTTC CACGACACCG CCGCCGGGGT GACGATCACG
GTGAACTCGG CATCCACCAC CAGTGACGTG GTGACCGTCA CCAAAACCTG A
 
Protein sequence
MRTLPRRFGS RRALRLAGLT RVTRVTRVTR LACAIALVST LVPLLGAGPV QADKRAPSTQ 
CALPNPSGWT GEGETTDYHQ FERPQGTKKA AMLFVDFPDA PAMDSTDAYY KFLAPAHDLM
TQFSAGAVDL SITPVRHWLH MPQDSASYDF ERGISWPQQA LYVKQAGELA AQYVDLSKFD
LIYIVPPKNA TAITFSPAYV FDPKQPNLIV HGKEVKWGVT LGQDMYVWGP KVLVHETSHT
FGLPDLYSFT DSDVHHWVGG FDVMGNIIGD APHHFGWEDW KIGWLANSQV ACLDAPGTFA
VRLKQVESLG GTKIAVVRTG QTTAVVAESR RPYGVDKGLC KSGVVIYKVN SATISGSGPI
RVQNSSPHTP TTTACNEAVD WGAYEPGQTF HDTAAGVTIT VNSASTTSDV VTVTKT