Gene Caci_6747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6747 
Symbol 
ID8338111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7784913 
End bp7785746 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID644959840 
Productprotein of unknown function DUF574 
Protein accessionYP_003117433 
Protein GI256395869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCG TCGACACCAT CGACAGCACA CTGATCCCCG GCTGGGTGCC CCCGGAGCTG 
GACACCACCA GGGCCCACAC CGCGCGTATC TACGAATACC TGCTCGGCGG GATGCACTAC
TTCGACGTGG ACCGCGAGGC CGCCGAGACG GCGCTGCGCC ACGTTCCGCA AGCCCGCGAG
ATCCTCCAGG AGAACCGCGC GTTCCTCAAT CGCGCGACCA GATTCCTCGC CGCCTCCGGC
ATCACGCAGT TCCTCGACCT CGGCAGCGGC CTGCCCGGCA CGGACAACAT CGGCGACACC
GCCCGCGAGG CGCACCCGCA GGCGCGCATC GTCTTCGTCG ACTACGACCC GATGGTCGCC
GTCCACGGCC GCGCCCTGGT GGCCGCCGCC GACCCGACGC ACACCGCGGT CGTCGAGGCC
GACGTCCGCC GCCCCGCCGA GGTGCTGGCC GACCCGGAAC TGCGCCGCGT GCTGGACCTG
AAGCAGCCGG TGGCGATCGT GATGAACTCC CTGCTGCACT TCATCGCGCC CGAAGAGGAC
CCGCACGCGA TGGTCGCCGA GTTCCTGGCC GCCGTCCCCG CCGGCAGCGC CCTGGTGGTC
TCGCACATCA CCGACGGCGG CCGCCCGGTC CAGGCCGAGG CGGCGGTCCG CGCCTGGGAC
CAGGCGACCT CGCCGATGTA CATGCGCAGC GAGAAGGAGA TCAGGGACCT GTTCACCGGC
ACCGAGATCA TCCAGCCCGG CATCGTGCCG CGGCCGCTGT GGCGCCCCGA CGGCGAGGTC
CGCGAGGACT GGCAGGAGAT CTGGGGTCTG GTCGGGGTGG GGATCAAGCG CTGA
 
Protein sequence
MDVVDTIDST LIPGWVPPEL DTTRAHTARI YEYLLGGMHY FDVDREAAET ALRHVPQARE 
ILQENRAFLN RATRFLAASG ITQFLDLGSG LPGTDNIGDT AREAHPQARI VFVDYDPMVA
VHGRALVAAA DPTHTAVVEA DVRRPAEVLA DPELRRVLDL KQPVAIVMNS LLHFIAPEED
PHAMVAEFLA AVPAGSALVV SHITDGGRPV QAEAAVRAWD QATSPMYMRS EKEIRDLFTG
TEIIQPGIVP RPLWRPDGEV REDWQEIWGL VGVGIKR