Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6736 |
Symbol | |
ID | 8338100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7771666 |
End bp | 7772628 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644959830 |
Product | phosphatidylinositol-specific phospholipase C X region |
Protein accession | YP_003117423 |
Protein GI | 256395859 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.130754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.957672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCCA CTCGTCGCAA TGTCCTGAAA TGGGGACTCA GCGGCACCGT CCTGGCCGCC ACCTCGCTCG GGCTGCCCGC CACGGCGCGC GCCGACTCCC CCGTCACGCC GGGCGGCAAG CCCACGGACC GCTGGATGAG CTATCTCGAC CCGAACCTGT CGCTGCTGGG GATGACGGTT CCCGGGACGC ACGACACCTG CTGCACCAAT CCCGCGAACG GCACCGAGTG GTCGCACACG CAGAACTGGG GGATCCCGCA GCAGTTGTCG GAGGGCGTGC GGTTCGTCGA CATCCGCTGC AACGGGTTGC AGGGGACGGC CAGCGAGATG GGCATCTACC ACTCCAGCTA CTACCAGGGC ATCCGGCTGC AGGACGTGCT GGACCAGTGC AAGGCGTTCC TCGCCTCGCA GCCGACCGAG ACGATCGTCA TGCGGCTGAA GAACGAGAAC GCCGGAGGCC AGGCGCTCAG CGACGCGGAG TTCCAGCGCC GGGTCACCTA CTACTTCGAC ACGCTCGGGT ATCGGGACCT GTTCCACATG TACGGCTGGC CGACGCTCGG TCAGGCGGCC GGCAAGGTGG TGCTGCTGGC GGACTTCGCG TTCCCGGCGT CGTGGAATCT GATCGGCTGG GCGGACAGCG CGAACTGGCA GTTCAACGTG CAGGACACGT ATACCGGGGT GTCCACGGGC TCGAAGGGTC AGCTGATCAC GCAGCAGTTC GACAACGCGT ACAGCAACCC GGCGCCGACG ACGATGTACG TGAACTTCCT CAGCCTGGCG CCGTCGATCA ACGACGGTCT GGGGTTTCCG AAGAACCTCG AGCAGACGCT GATGGACAAC TCCATCTACC CGTATCTGCG TGCCCGGACC GGGCAGCGCG CGCGGTTCGG GATCGTGCCG ATGGACTTCC CGGACTTCCA CGTGAACGTG CTGGAGATGT TGATCGACAA GAACTTCGCC TGA
|
Protein sequence | MNPTRRNVLK WGLSGTVLAA TSLGLPATAR ADSPVTPGGK PTDRWMSYLD PNLSLLGMTV PGTHDTCCTN PANGTEWSHT QNWGIPQQLS EGVRFVDIRC NGLQGTASEM GIYHSSYYQG IRLQDVLDQC KAFLASQPTE TIVMRLKNEN AGGQALSDAE FQRRVTYYFD TLGYRDLFHM YGWPTLGQAA GKVVLLADFA FPASWNLIGW ADSANWQFNV QDTYTGVSTG SKGQLITQQF DNAYSNPAPT TMYVNFLSLA PSINDGLGFP KNLEQTLMDN SIYPYLRART GQRARFGIVP MDFPDFHVNV LEMLIDKNFA
|
| |