Gene Caci_6736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6736 
Symbol 
ID8338100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7771666 
End bp7772628 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID644959830 
Productphosphatidylinositol-specific phospholipase C X region 
Protein accessionYP_003117423 
Protein GI256395859 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.130754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.957672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA CTCGTCGCAA TGTCCTGAAA TGGGGACTCA GCGGCACCGT CCTGGCCGCC 
ACCTCGCTCG GGCTGCCCGC CACGGCGCGC GCCGACTCCC CCGTCACGCC GGGCGGCAAG
CCCACGGACC GCTGGATGAG CTATCTCGAC CCGAACCTGT CGCTGCTGGG GATGACGGTT
CCCGGGACGC ACGACACCTG CTGCACCAAT CCCGCGAACG GCACCGAGTG GTCGCACACG
CAGAACTGGG GGATCCCGCA GCAGTTGTCG GAGGGCGTGC GGTTCGTCGA CATCCGCTGC
AACGGGTTGC AGGGGACGGC CAGCGAGATG GGCATCTACC ACTCCAGCTA CTACCAGGGC
ATCCGGCTGC AGGACGTGCT GGACCAGTGC AAGGCGTTCC TCGCCTCGCA GCCGACCGAG
ACGATCGTCA TGCGGCTGAA GAACGAGAAC GCCGGAGGCC AGGCGCTCAG CGACGCGGAG
TTCCAGCGCC GGGTCACCTA CTACTTCGAC ACGCTCGGGT ATCGGGACCT GTTCCACATG
TACGGCTGGC CGACGCTCGG TCAGGCGGCC GGCAAGGTGG TGCTGCTGGC GGACTTCGCG
TTCCCGGCGT CGTGGAATCT GATCGGCTGG GCGGACAGCG CGAACTGGCA GTTCAACGTG
CAGGACACGT ATACCGGGGT GTCCACGGGC TCGAAGGGTC AGCTGATCAC GCAGCAGTTC
GACAACGCGT ACAGCAACCC GGCGCCGACG ACGATGTACG TGAACTTCCT CAGCCTGGCG
CCGTCGATCA ACGACGGTCT GGGGTTTCCG AAGAACCTCG AGCAGACGCT GATGGACAAC
TCCATCTACC CGTATCTGCG TGCCCGGACC GGGCAGCGCG CGCGGTTCGG GATCGTGCCG
ATGGACTTCC CGGACTTCCA CGTGAACGTG CTGGAGATGT TGATCGACAA GAACTTCGCC
TGA
 
Protein sequence
MNPTRRNVLK WGLSGTVLAA TSLGLPATAR ADSPVTPGGK PTDRWMSYLD PNLSLLGMTV 
PGTHDTCCTN PANGTEWSHT QNWGIPQQLS EGVRFVDIRC NGLQGTASEM GIYHSSYYQG
IRLQDVLDQC KAFLASQPTE TIVMRLKNEN AGGQALSDAE FQRRVTYYFD TLGYRDLFHM
YGWPTLGQAA GKVVLLADFA FPASWNLIGW ADSANWQFNV QDTYTGVSTG SKGQLITQQF
DNAYSNPAPT TMYVNFLSLA PSINDGLGFP KNLEQTLMDN SIYPYLRART GQRARFGIVP
MDFPDFHVNV LEMLIDKNFA