Gene Caci_6726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6726 
Symbol 
ID8338090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7757547 
End bp7759289 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content68% 
IMG OID644959820 
Producthypothetical protein 
Protein accessionYP_003117413 
Protein GI256395849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.474731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTCA GCTTTGACGA TCTCGACACC GCGCAGAGCG AAGTTCGGCG ACTGCTTTCC 
GGCGGGCTGG AGGAGGACCT AGAGGTAAGG CTCGGCGCTA AAACGTATAT GAGGACTCGT
CCTCTCGTTT TCACCGAGCT GGATTCGGGG CGGGACGGGC ACACGGTGAC GTGGAGCGCC
GAGCCTGGTG GTCACGTGGA GCTCTCCGGC GGCGTCGCGC TGGACGGATG GCAGCCGGAG
GGGGACGGCC GGTGGGTCGC CATGGTTCCG GACGTGATTT CCACGCCGCG CCAGCTGTAC
GTCAACGGGC TGCGAGCGTC GTGGGCTCGG AGCGACTGGC TGGATCACGC GGACTGCAAG
ATCGGTCCGG AGGGGATAAC CGGCGCCGGC GCGCTCGGGA TCGCGGCGTA TGCGCGGCCT
TCGGACGTCG AGGTGGTGTT CCGGGTGCGG TGGCGTGACT ACCACTGCCC GGTCGCCAGC
ATCGCGGACG ACCTGATCCG TTTCGCAGAG CCCTGTTGGA CGAACGCCTT GCCCGGCACG
GGTCGCGTCG GACCACATTG GGACAACACG GCGGTCGGTA CCGAGATCCA TGGCTGGTCG
ATGTTCGCGA CCAATGCCTT GGAACTGCTG ACCGATCCTG GTTTCTTCGT CTGGAACTCT
GAGGAGCGGA CGGTCACCTA CCTGCCTCGC GAGGGCGAGG ACATGGAACG CGCGGACGTT
GTCGTCCCTT GCACCGAGCA GTTGGTGGTG GTGGAAGGTG CGCATGATCT CGTACTCAAG
GGTCTGAGTT TCGCGCACAC CGCCTGGCAC CTGCCCGACG GGTACGTCGG AGCGCAGGCG
GGATTCACGC TGACCGGCGC CTCGGGACCG CTGGGCGAAG CCGGATCCCA CTACACGAAG
CCGGTCGCGG CGCTGAGCGT GCGGGGCGGG CGTCGGGTGA CGGTGAGCGG CTGCGCGTTC
GTCCATCTCG GCGGCGCGGG AGCTGTGCTG GAGGCGGGGA CCAAGGACAG CACGGTCACG
GCGTGCTCGT TCAGCGATGT CTCGTCCGGC GGTGTCTATG TCGGCGACAT CGATCCGCAT
CCCGCGCCGG GGCTCGCGGA CGAGGGCAAC ACAGTGTCCT TCAACACCTT CCACGGCACC
GGTGCGGAGT TCACGGACTC GGTCGCGATC TGGGCCGGCT ACACCCGAAA CCTGACCATC
GACCACAACA CGCTGGAGCA GCTGCCCTAT TCGGGGATCA GCGTCGGCTG GGGATGGAAC
CAGCCCGAGG CGCAGGATCC GTGGCTCGGG GACAACCGGA TCACCGCGAA CCGGATCGTC
GACGTGCTGC GCGTCGCCGA GCGCCAGCAC GACGGCGGCG CGATCTACAC GCAGGGTCCA
CAGCGCGGGA CGGTCGTCGA AGCCAACTAC ATCGACCGGT CCGAGTACGG CACCACCGCG
AACGACGGCA ACGGGATCTA CCTGGACGAG CAGAGTTCGC ACATCCTTGT CGCGGGCAAT
GTCGTCACGC GGGTCGGCTA CAAGTGGGTG TCGAACTGGG CCGAATACGG GGTCGAGAAC
CGCGCGGCCG GCAATTGGAC GGACAACACG ATCACCCCTG CGTTCTCCGG CGCCGGAAGC
GTCATGGAGG ACAACGCCGA GGGGTTGACC GAGCTGCCGC CCGAAGCCGT CCGCGTCGCC
GAGGGCGCCG GAGCCGGGCC GTGGCCCGCA CCGGTGGCTG CGCTCGGCAT CCCAGAGCCC
TGA
 
Protein sequence
MLLSFDDLDT AQSEVRRLLS GGLEEDLEVR LGAKTYMRTR PLVFTELDSG RDGHTVTWSA 
EPGGHVELSG GVALDGWQPE GDGRWVAMVP DVISTPRQLY VNGLRASWAR SDWLDHADCK
IGPEGITGAG ALGIAAYARP SDVEVVFRVR WRDYHCPVAS IADDLIRFAE PCWTNALPGT
GRVGPHWDNT AVGTEIHGWS MFATNALELL TDPGFFVWNS EERTVTYLPR EGEDMERADV
VVPCTEQLVV VEGAHDLVLK GLSFAHTAWH LPDGYVGAQA GFTLTGASGP LGEAGSHYTK
PVAALSVRGG RRVTVSGCAF VHLGGAGAVL EAGTKDSTVT ACSFSDVSSG GVYVGDIDPH
PAPGLADEGN TVSFNTFHGT GAEFTDSVAI WAGYTRNLTI DHNTLEQLPY SGISVGWGWN
QPEAQDPWLG DNRITANRIV DVLRVAERQH DGGAIYTQGP QRGTVVEANY IDRSEYGTTA
NDGNGIYLDE QSSHILVAGN VVTRVGYKWV SNWAEYGVEN RAAGNWTDNT ITPAFSGAGS
VMEDNAEGLT ELPPEAVRVA EGAGAGPWPA PVAALGIPEP