Gene Caci_6725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6725 
Symbol 
ID8338089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7755833 
End bp7757563 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content69% 
IMG OID644959819 
ProductHyaluronate lyase 
Protein accessionYP_003117412 
Protein GI256395848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAG CGATGTTCGA GGAGCTGCTC GTCCGGTACG AGCAGCGGCT CCGCCGGCGG 
ACCGAGGCCG CTGCGATCCA GCTGGACCTC GACGTGTCCG ACGAAGGACA CACCACCTTG
AGTTACGCAC AGCTGCGGAC GCTGGCGGCG GCTTCGGCCG ACGACGCTTC GGCGGCGACA
GTCGTAGAGG CTCTGCGCTT CCTGCATGAG AACGCCTTCC ACCCCGAGGC GGAGGAGACC
GGCAACTGGT GGCACTGGGA GATCGGGACG CCGCGCATCC TGCTGGATAT CTGTGTCCTG
CTTCGCGCGC ACATCCCGGA CGCCGATCTG AAGCGGTATC TCGCGACAGT GCAACGGTTC
TGCCCGGACC CCGACCGCCG GGTCAAGACC GGACCGTGGT CGCCACTGAC GGAGACCGGG
GCGAACCGCG CTGACAAAGC CCTGATCGTC GCGCTGGCAG GACTGCTCGC CGGAGACGCC
GATCGGGTCG CGCTGGCGCG GGACGGGTTG TCGAGCCTGT TCTCGTACGT GGCCTCCGGC
GACGGTTTCT ACGAGGACGG CTCGTTCGTC CAGCACGACA CGGTCGCGTA CACCGGTTCC
TACGGCGTCG TGCTGCTGAC GTCGGTCGCG GAGATCCTGG CGCTGCTGCG CGGTTCGCCG
TGGGAGGTCG TCGATCCGGG CGTGTCAGTG GTCTTTGACG CAGTCGAGAA GGCGTTCCTG
CCGTTCCTTT TCGAGGGCCG GATGATGGAC GCGGTGCGAG GTCGGGCCAT CGCTCGGCAG
CATTCGCGGG ATCTGGACAT CGGCGCCGCG ACTCTTGACG CGATTCGGCT GCTGGCAGAA
AGCGCTCCGG CTTCCTACGC CGAGCGGTGG GCGTCTTTGG CTCGGCCCGA GGGGTTCCAC
GTCTTCGGCT CGATGGATCG GGTGGTGCAC CACCGGCCGC GCTGGTCCGC CGCGCTGTCG
TTGTCGTCGG AGCGCATCGC GCGGTATGAG TGCGGCAACG GCGAGAACCT GCACGGCTGG
TACACCGGCG ACGGCATGCT GTACATCTAC GACCTCGCCG ATCCTGACCA CTACACCGAC
GAGTTCTGGG CGACGGTCGA TCCGTACCGG CTGCCCGGGA CGACGGTCGA CACGCGGCGA
CGTGAGGACG TCGGACGCGG GTCGGGCCGG GGCACCGGCG CGATCACGGC ACCGAACCGG
ATCGCCGGCG GGACGATCGT CACCGGCGGA TTCGGTACCG CCGACCTCGA TCTGCACGGC
GAGGGAAGCA CGCTGCGCGC CCGCAAGAAA TGGCACTTCC TCGACGACGC GGTGATGGCT
CTCGGGACGG ACATCTCCGC ATCCGACGGC CGCCGGATCG AGACGATCGT GGAGAACCGG
AACCTGCGGT CCGACGCCGG GCGGCGGTTC GTCGTGGACG GTGTCGCGCA GGCTCCCGGG
CTCGGAGTCG AGCGGCGGCA TCACGGCGTG CAGTGGGCGT ATCTGGAGGG CGTCGGCGGC
TATGTGTTCC CCGGCGGCGC GGATCTGATG TCGCTGCGCG AGGAGCGCGT GGGGACGTGG
CATGCCATCG ACGTGGGAGT CGGCACCGAG GGTGACGACG TCGAGATCCG GCGGATCTTC
CACACCTTGT GGCTCGATCA CGGCGTCTCG CCGCGGCGGG CCGGATACAT GTACGTGCTC
CTGCCGGGAG CCAGCGAAGA GGGGACGGCG AGACGTGCTG CTCAGCTTTG A
 
Protein sequence
MREAMFEELL VRYEQRLRRR TEAAAIQLDL DVSDEGHTTL SYAQLRTLAA ASADDASAAT 
VVEALRFLHE NAFHPEAEET GNWWHWEIGT PRILLDICVL LRAHIPDADL KRYLATVQRF
CPDPDRRVKT GPWSPLTETG ANRADKALIV ALAGLLAGDA DRVALARDGL SSLFSYVASG
DGFYEDGSFV QHDTVAYTGS YGVVLLTSVA EILALLRGSP WEVVDPGVSV VFDAVEKAFL
PFLFEGRMMD AVRGRAIARQ HSRDLDIGAA TLDAIRLLAE SAPASYAERW ASLARPEGFH
VFGSMDRVVH HRPRWSAALS LSSERIARYE CGNGENLHGW YTGDGMLYIY DLADPDHYTD
EFWATVDPYR LPGTTVDTRR REDVGRGSGR GTGAITAPNR IAGGTIVTGG FGTADLDLHG
EGSTLRARKK WHFLDDAVMA LGTDISASDG RRIETIVENR NLRSDAGRRF VVDGVAQAPG
LGVERRHHGV QWAYLEGVGG YVFPGGADLM SLREERVGTW HAIDVGVGTE GDDVEIRRIF
HTLWLDHGVS PRRAGYMYVL LPGASEEGTA RRAAQL