| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6724 |
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| Symbol | |
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| ID | 8338088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7754124 |
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| End bp | 7755815 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959818 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003117411 |
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| Protein GI | 256395847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACAC CGCAGAGCCT CGGGCGCCGC GGATTCCTGC GCGGCGTCGG CGCCGCGGCG
GCCCTCACCG CGGGCGGCTC GACGCTGGCC GCGTGCGGCA GCGGCAAGGC CGCGGCCGTG
AACGAGGCGG GCAGCGCCGC GCAGGTCCAG CTGCCGACGT ACACGCCGCT GGCCAACGGT
CCGACGCCGG ACCTGCCGGG CACCGACGCC GGCGTCCCGG CCGGGTTCTA CGACTACCCG
GCGTCCCCGA CCGCGGCGTT CGCCAGCCCG CCGCTGTCCG GCGGCAAGTT CTCGGCGATG
ACGCCGCTGT TCACCGCTCC CCCGCCGGCC CGCGGCTCGA ACCCGGCGTG GCAGGCGATG
GAGAAGAAGC TCGGCGCGAG CGTCGACATC ACGATGGTGG TCGGCGACGA CTTCGACACC
AAGCTCTCCA CCCTGATCGC CGGCGGCGGA CTGCCGGACC TGATCCAGTA CGACGGCCTC
GGCGGCGTCC CGACCATCAG CAACCTGCCG CAGTTCCTGG ACTCGCAGAT CGCCGACCTG
ACCGCGCTGA TCGGCGGCGA CAAGGTCAAG GAATACCCGC ATCTGGCCGC CATCCCGAAG
GTGTTCTGGG AGCAGTGCAC GGTCGCCGGG AAGCTGTACT TCATCCCCAT CCCGCGCGGC
ATCAGCGCCG GCGCCGGGCT GTACCGGCAG GACCTGTTCG CCGCCGCCGG AGTCACCAGC
AACAAGGACA TCAAGAACTC CGACGACTTC TTCACGCTTC TCAAGGAGCT GACGAACCCG
GGCAAGGACC GCTACGCGCT GGCCGGCAAC TCCGGCAACG GCGGCTATTC CGGGGCGATC
TTCGAGCAGA TCTTCGGGGT CCCGAACAAG TGGCGGGTGG ACGGCGGCGG CAAGCTGACC
GCGGACATCG AGACCGACGA GTTCCGGGCG GCGCTGGAGT TCATGGTGAA GGTAGCCAAG
GCCGGCTGCT TCTATCCGGG CGCGCAGGGC TGGACCAAGG CCAAGATGGA GGACGCCTTC
CAGTCCGGTA AGGCGGCCAT GATCTACGAC GGTCTCCCGG CGCTGTCCAC CAGCGTCTGG
GCCACCGCGC AGAAGATCGA CCCGAACGCC AAGCTGATGC CGTTCGTCCC GTTCGGCGCC
ACCGGCGGAC CCGGCGTCGC CTGGCAGGAC AACGTGGTCT TCGCCGGCAC GATGCTGAAG
AAGGCGGACC CGGCGAAGCT GGCGGAGGTC CTGAAGCTCG CCGACTTCCT CGCCGCGCCG
TTCGGCACCG AGGAGTACCT GCTCAAGACC TACGGCGTCG AAGGCGCGGA CTACACGCTG
GACGCCAACC ACAACCCGGT GCAGACCGCC CAAGGCAAGA ACGACGCGAA CGTCACCTGG
AAGTACGTCG CCGCGCCGCA GCTGGTCACC TACAACCCCG GTGTCAATGC TCTGACGGAC
GCGGTCCACC AGGCCTACAC CGAGCTGGTG CCGATCGCCG TGCCGAACCC GACCGCGACG
CTGTACTCGC CGACCTTCGG CAAGCAAGGC GTGGCGCTGT ACAAGGCGGT CACGGACACC
GTGACGCAGG TGATCGGCGG GCAGTCGAGC ATGAGCGCCT TCGACAACGC GGTGAAGACC
TGGCGCAGCG GCGGCGGCGA CCAGATGCGG TCGGAGTTCG AGCAGGCGTA CGCGAGCGCG
CCGAAGAGCT GA
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| Protein sequence | MHTPQSLGRR GFLRGVGAAA ALTAGGSTLA ACGSGKAAAV NEAGSAAQVQ LPTYTPLANG
PTPDLPGTDA GVPAGFYDYP ASPTAAFASP PLSGGKFSAM TPLFTAPPPA RGSNPAWQAM
EKKLGASVDI TMVVGDDFDT KLSTLIAGGG LPDLIQYDGL GGVPTISNLP QFLDSQIADL
TALIGGDKVK EYPHLAAIPK VFWEQCTVAG KLYFIPIPRG ISAGAGLYRQ DLFAAAGVTS
NKDIKNSDDF FTLLKELTNP GKDRYALAGN SGNGGYSGAI FEQIFGVPNK WRVDGGGKLT
ADIETDEFRA ALEFMVKVAK AGCFYPGAQG WTKAKMEDAF QSGKAAMIYD GLPALSTSVW
ATAQKIDPNA KLMPFVPFGA TGGPGVAWQD NVVFAGTMLK KADPAKLAEV LKLADFLAAP
FGTEEYLLKT YGVEGADYTL DANHNPVQTA QGKNDANVTW KYVAAPQLVT YNPGVNALTD
AVHQAYTELV PIAVPNPTAT LYSPTFGKQG VALYKAVTDT VTQVIGGQSS MSAFDNAVKT
WRSGGGDQMR SEFEQAYASA PKS
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