Gene Caci_6713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6713 
Symbol 
ID8338077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7743490 
End bp7744518 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID644959807 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003117400 
Protein GI256395836 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.781502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGA AGACAGTCGG GATCTCGGAC GTCGCACGCG AGGCCGGCGT GTCCGTCGGC 
ACGGTCTCCA ACAGCTTCAA CCGCCCGGAT TCGGTGGCGC CGGAGACCCG CGCCCGCATC
CTGGCGGTGG TGGAGCGGCT GGGTTACGTA CGCAGCGAAT CCGCCCGCCA GCTGCGCACG
GGGACCAGCC GCATCGTCGC CCTGCTGGTA CTGGACCTGG CGAACCCCTT CTTCGTGGAG
GTCGCGAACG GCGCCGAACG AGCGGCACGC GCCGCGGGCC TCGGCGTGAT GGTGTGTACG
AGCGCGCAGT CCCCGTCGGA GGAGGCGGAG TACGTCGGAC TGTTCACCGA GCAGCAGGTG
CGCGGCGTCC TGGTGATACC GGCCGACCCG ACCGGACGCT CGCTGGAACC GTTGCGCCGT
CAGGGAATCC CCTACGTCGT GGTGGACCGC CTGGTCGAAG ACGCCGAAGT CTGCTCGGTA
TCAGTGGACG ACGTCGCCGG CGGCCGCCTG GCCGTCGAGC ACCTGCTCGC CCAGGGCCAC
CGCCGCGTCG CCTACATCAG CGGCCCGGCG CACCTGCAAC AGATCCGCGA CCGCCGCACC
GGCGCCCTGC ACGCCATCGC CGCCGCCGGC CTCCCCCCGC ACACCCTGCA CGAACTCCCC
ACCGCGCACA TGACCATCGC CGCCGGCCGC GACGCCGCCG CCCGCCTCCT CGGCCTCGCC
GACCGCCCCA CCGCAGTGTT CTGCGCCAAC GACCTCCTGG CACTCGGCCT GGAACAGGCC
CTGTACTCAG CCGGAGTGAA GGTCCCCGAA GAGGTGGCGA TAGTCGGCTA CGACGACATC
GAATTCGCCT CCGCAGTCGC CGTGCCACTC ACCTCAGTCC GCCAACCCGC CGCAGAGATG
GGACGGCTCG CGGCGCAAAT GCTGCTGGCC GAGGCCGCCG GCGACGACGG GATCGACCAC
GAGCACCGGT CGGTGGTGCT GCAACCGGAG TTGGTGGTGC GGACCTCGAG CCTGCACCGG
GTCGGGTAG
 
Protein sequence
MTKKTVGISD VAREAGVSVG TVSNSFNRPD SVAPETRARI LAVVERLGYV RSESARQLRT 
GTSRIVALLV LDLANPFFVE VANGAERAAR AAGLGVMVCT SAQSPSEEAE YVGLFTEQQV
RGVLVIPADP TGRSLEPLRR QGIPYVVVDR LVEDAEVCSV SVDDVAGGRL AVEHLLAQGH
RRVAYISGPA HLQQIRDRRT GALHAIAAAG LPPHTLHELP TAHMTIAAGR DAAARLLGLA
DRPTAVFCAN DLLALGLEQA LYSAGVKVPE EVAIVGYDDI EFASAVAVPL TSVRQPAAEM
GRLAAQMLLA EAAGDDGIDH EHRSVVLQPE LVVRTSSLHR VG