Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6713 |
Symbol | |
ID | 8338077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7743490 |
End bp | 7744518 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959807 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003117400 |
Protein GI | 256395836 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.781502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAAGA AGACAGTCGG GATCTCGGAC GTCGCACGCG AGGCCGGCGT GTCCGTCGGC ACGGTCTCCA ACAGCTTCAA CCGCCCGGAT TCGGTGGCGC CGGAGACCCG CGCCCGCATC CTGGCGGTGG TGGAGCGGCT GGGTTACGTA CGCAGCGAAT CCGCCCGCCA GCTGCGCACG GGGACCAGCC GCATCGTCGC CCTGCTGGTA CTGGACCTGG CGAACCCCTT CTTCGTGGAG GTCGCGAACG GCGCCGAACG AGCGGCACGC GCCGCGGGCC TCGGCGTGAT GGTGTGTACG AGCGCGCAGT CCCCGTCGGA GGAGGCGGAG TACGTCGGAC TGTTCACCGA GCAGCAGGTG CGCGGCGTCC TGGTGATACC GGCCGACCCG ACCGGACGCT CGCTGGAACC GTTGCGCCGT CAGGGAATCC CCTACGTCGT GGTGGACCGC CTGGTCGAAG ACGCCGAAGT CTGCTCGGTA TCAGTGGACG ACGTCGCCGG CGGCCGCCTG GCCGTCGAGC ACCTGCTCGC CCAGGGCCAC CGCCGCGTCG CCTACATCAG CGGCCCGGCG CACCTGCAAC AGATCCGCGA CCGCCGCACC GGCGCCCTGC ACGCCATCGC CGCCGCCGGC CTCCCCCCGC ACACCCTGCA CGAACTCCCC ACCGCGCACA TGACCATCGC CGCCGGCCGC GACGCCGCCG CCCGCCTCCT CGGCCTCGCC GACCGCCCCA CCGCAGTGTT CTGCGCCAAC GACCTCCTGG CACTCGGCCT GGAACAGGCC CTGTACTCAG CCGGAGTGAA GGTCCCCGAA GAGGTGGCGA TAGTCGGCTA CGACGACATC GAATTCGCCT CCGCAGTCGC CGTGCCACTC ACCTCAGTCC GCCAACCCGC CGCAGAGATG GGACGGCTCG CGGCGCAAAT GCTGCTGGCC GAGGCCGCCG GCGACGACGG GATCGACCAC GAGCACCGGT CGGTGGTGCT GCAACCGGAG TTGGTGGTGC GGACCTCGAG CCTGCACCGG GTCGGGTAG
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Protein sequence | MTKKTVGISD VAREAGVSVG TVSNSFNRPD SVAPETRARI LAVVERLGYV RSESARQLRT GTSRIVALLV LDLANPFFVE VANGAERAAR AAGLGVMVCT SAQSPSEEAE YVGLFTEQQV RGVLVIPADP TGRSLEPLRR QGIPYVVVDR LVEDAEVCSV SVDDVAGGRL AVEHLLAQGH RRVAYISGPA HLQQIRDRRT GALHAIAAAG LPPHTLHELP TAHMTIAAGR DAAARLLGLA DRPTAVFCAN DLLALGLEQA LYSAGVKVPE EVAIVGYDDI EFASAVAVPL TSVRQPAAEM GRLAAQMLLA EAAGDDGIDH EHRSVVLQPE LVVRTSSLHR VG
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