Gene Caci_6706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6706 
Symbol 
ID8338070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7729445 
End bp7731439 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content73% 
IMG OID644959800 
Productserine/threonine protein kinase 
Protein accessionYP_003117393 
Protein GI256395829 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0848687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.105992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC ACAGTGGTTC GACGGGTACG ACGGGTACGA CGGGTACGGC GCCGAAGGTG 
AATCAGGCGT CGGAGACGCC CGAGCACGTC CCGGGATACC GGGACTTGAC GCGCATCGGG
CACGGCGGTT TCAGCGTGGT CTACCGCGCC GTGCAAGAGT CCTTCGACCG CGACGTCGCC
CTCAAGCTGC TGACGATTGT CGGCCCGGAC GAGGACACCC GGCGCCGGTT CGAGCGCGAG
GTCCGGCTCG CCGGCCGGCT CAGCGACCAC CCGCACGTGG TGACCGTGCT GGACACCGGG
ACGACCGCCT CGGGCCGGCC GTATCTGGCC ATGGACCTGT ACGACGGCGG GTCGATGAAG
CAGTGGCTGC AACGGCGCGG CCGGCTCAGC GGCGCGCAGG CGGCCGGGGT CGGCGCGAAG
ATCGCCGACG CGCTGCACGC CGCGCACGCG CTCGGGGTGC TGCACCGGGA CGTGAAGCCC
AACAACATCC TCATCTCCCG CTACGGCGAG CCGGCGCTGG CCGACTTCGG GGTCTCGTGG
CTGCTGGACG CCAGCAACTC CAGCTCAGTG CTCGACGTTT TCTCCCCGCA GCACGCCGCG
CCGGAGCTGA TGACGCGCGG CGTGCCGACG GCCTCCTCCG ACGTGTACGC GCTCGGCTCG
ACGCTGTACG AGCTGATCGC CGGCCGTCCG CCGTTCGGCG CGCCGGGTCA GGACGTGCGC
CGGACCATCT ATCTGGCGCT CAGCGAGCCG GCGCCGCGGC TGGAGTGCCC GGATCTGCCG
GGGCTGCCGG AGGTCATCGG CCGCGCCATG GCCAAGGAGC CCGAGGACCG GTTCCCGGAC
GCGGCCGCCT TCGGGCGCGC GCTTCGAGCC CTGATACCCG ACGGCCGCTC GGCCGCGCTG
GTGATGGCGG ATCCGATGGC GGTGGAGTTC CCGGCTGTGA TCAACCCGTC CCGGTCGGCT
GACGCGACCG ACGCGATGGA CATGTACGCC GGCGACCACT CCGATGACTA CGCCGATGGC
TACTCCGACG ACGACGAGTA CATCTCGCCT CCGGACGACA CCATGGTCCG GCCGGACCGG
GTGGACGCCG ACGCCCCGAT CCCCGGTCCG CGCACCGGCA GCGGTCGGCG CCGCCCGGAC
GATCGGCGCG GCTTCGACGA TCGGCGCGGA CCGGACGCCG CCCGCAATCG GCGCGGCGGC
CAGGGCGGTC GCGGCGACCG GACCGCCGTC GCCGCCGGGG CGGGCGACGA GGGACGCGGG
ATCGGCAAGC CCATCGCGCT GGTGGCGGTC GTCGCCCTGG TCGCGGTCGG CGCGTGGGTG
CTGGTGACGT CGCAGGGTTC TGGCTCTTCC CCCAAGGACG CCACCGCCGC ACAGACGCCG
AGCGCGACGG ACACCGGATC GCCCGGCGCG TCCTCAGCCG TGCAGAGCAC GCCCACCGCC
ACCCCGACGC GTTCCAGCTC CAGCAGCTCG CCGTCGGCGA CCCGGCACAC GTCGAGCTCC
GGGACGCCGA CGCACACGGT GACCACGACC GCGGCCTCCT CCAGCGCCGC GCTCCCGCCG
CCGGTCACCA CTTCGCCGAC CGGACCGCTG CTGCCGGCGA ACTACCATCG GTTCCAGAAC
TCGGGCAGCG GGGACTGCCT GACGCAGCCC AGCGGCTCCG CTGCGGCGGC GCACCAGGGC
TGTGTGGACA GCAAGACGCA GGGATGGGAG TTCACAGTGC CCCTCACCGG CATCCTCGGG
GCCGTCACCG GCCAGGAGGA ACTGGTCAAC GGAGGCACCA GCGACTGCCT GACCGGGGGG
CCCGGCGGGG TGAGTGTGAA ATCGTGCAGC GGGAGCCGGA CGCAGCTGTG GTCGAAGACC
GGCGGCTCCG GCGGCTCCAC GCAACTGATG AACGCCGTCG ACGGCATGTG CCTGAAGACT
TCGGGCGGGT CCGTGGCGGA GGCGGCGTGC GACGGCGATC CCAGTGAGTT GTGGTCGGAG
GACGGAAACG TCTGA
 
Protein sequence
MTRHSGSTGT TGTTGTAPKV NQASETPEHV PGYRDLTRIG HGGFSVVYRA VQESFDRDVA 
LKLLTIVGPD EDTRRRFERE VRLAGRLSDH PHVVTVLDTG TTASGRPYLA MDLYDGGSMK
QWLQRRGRLS GAQAAGVGAK IADALHAAHA LGVLHRDVKP NNILISRYGE PALADFGVSW
LLDASNSSSV LDVFSPQHAA PELMTRGVPT ASSDVYALGS TLYELIAGRP PFGAPGQDVR
RTIYLALSEP APRLECPDLP GLPEVIGRAM AKEPEDRFPD AAAFGRALRA LIPDGRSAAL
VMADPMAVEF PAVINPSRSA DATDAMDMYA GDHSDDYADG YSDDDEYISP PDDTMVRPDR
VDADAPIPGP RTGSGRRRPD DRRGFDDRRG PDAARNRRGG QGGRGDRTAV AAGAGDEGRG
IGKPIALVAV VALVAVGAWV LVTSQGSGSS PKDATAAQTP SATDTGSPGA SSAVQSTPTA
TPTRSSSSSS PSATRHTSSS GTPTHTVTTT AASSSAALPP PVTTSPTGPL LPANYHRFQN
SGSGDCLTQP SGSAAAAHQG CVDSKTQGWE FTVPLTGILG AVTGQEELVN GGTSDCLTGG
PGGVSVKSCS GSRTQLWSKT GGSGGSTQLM NAVDGMCLKT SGGSVAEAAC DGDPSELWSE
DGNV