Gene Caci_6700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6700 
Symbol 
ID8338064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7719800 
End bp7720720 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID644959794 
Producthypothetical protein 
Protein accessionYP_003117387 
Protein GI256395823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0587904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATC ATCCCGACGG CCGCGGTCCC GCGGTCTTCA TCTCCTACGC GACAGCCGAC 
CGCACCGAGG TCCTGAAGTT CCACCAAGAC CTCCTGGAGC GCGGGATCGA CCCCTTCCTC
GACATCATGG ACATCCTCCC GGGCGACGAC GTCGTGATGA GCATCAACGG CGCCCTGGAA
CGCTCGGACT TCTACGTGCT CGTCTGGTCC GCGGCGGCAC GCGACCGCTA CTGGGTCAAC
AGCGAGATCT CCGCGGCGAT GGTGCTGGAG CAGCGCCGCG CGCGCCCCTT CGTCTTCATC
GTGCGCCTGG ACGACAGCGA ACTGCCGCCG GTCCTGGCTC CCCGCCGATA CCTGGACGCC
TTCGGCGGAC GCCGACAGGC CGCCGCCGAG CAGCTGACGG CGGTCTGGAC GCGCGACCGC
GCGGTCGGCA CCAAGGTCCT GCCCGCACCC GCGCCGGTCC GCGAGCCGTC CCCGCGCGAC
GAGCACGAGC AGCACGAGCA GACCATACAC ATCTACGCGC GCAACCAGTC GCTCCAGGTC
TCGCACGAAG TCCGGATCCC CGTGGGCGCC ACATCGCGGC AGCTCGTCGC CGCGCTCAGC
GAGCAGCTGG CGCTCCCGAC GGAGGCCTCG GAGTACGGAG GGGCAGTAGG CGTTCGCTTC
AGCTACCGGT ATCAGCACGC CGGCGAGCTC TTCGCCGAGG ACTCCGACGT GGTCCTCGGA
CTCACCGAGG GCGATGTGGT CGACATCGAA GTCGTCGTCG AGCCCTTCGG CCCGGACGGC
GCGCTGGCGG ACCCCGTCTC GTTCCTGCCC GGACGGGACT ACGCGATCCC GCCGGAAATG
ATCCGCGAGT TGTGCGAAAA GGCTATCGAG CACTTGCTCG CCGAGGACCC GGACGACAAT
CAGCACTCTG ACGATCAGTA A
 
Protein sequence
MPHHPDGRGP AVFISYATAD RTEVLKFHQD LLERGIDPFL DIMDILPGDD VVMSINGALE 
RSDFYVLVWS AAARDRYWVN SEISAAMVLE QRRARPFVFI VRLDDSELPP VLAPRRYLDA
FGGRRQAAAE QLTAVWTRDR AVGTKVLPAP APVREPSPRD EHEQHEQTIH IYARNQSLQV
SHEVRIPVGA TSRQLVAALS EQLALPTEAS EYGGAVGVRF SYRYQHAGEL FAEDSDVVLG
LTEGDVVDIE VVVEPFGPDG ALADPVSFLP GRDYAIPPEM IRELCEKAIE HLLAEDPDDN
QHSDDQ