Gene Caci_6699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6699 
Symbol 
ID8338063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7719133 
End bp7719780 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID644959793 
ProductNUDIX hydrolase 
Protein accessionYP_003117386 
Protein GI256395822 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.121967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA GGAGCGCACG CTGTGCGGCG ACTGGTAGCG GAGTGAACGC GACCGATAGC 
CCAGCCATAG AAGTCAACAC AGTCGCCGAG ATAGCCGAAG CTGCGGAGAC GACCGACTGG
CGGCGGCTGG ACAGCGTCGT GGTCTTGGCG ACGCCCTGGT TCGACGTACG TCAGGATGCT
GTCATCCGTC CCGACGGCGC GGCGGACGTC TATCACCACG TCGCCACTCC CGGCTCGGTG
ACGGTGCTGC CGGTCGCGGA GGACGGGCGC GTTCTGTTGA CCCGCCAATG GATCTACACG
CACGGCGGCG TCCAGTGGCG CCTTCCCGCC GGCACCATCG AGCGCTTCGA CGAGCGCCCC
GTCGCCGCCG CGCGCCGCGA GCTGGCTGAG GAGACCGGGC TGCGCGCCGC ACGCTGGGTC
GCGCTCGGAG CCGTCAACGG CGCCGACAGT CTGACGAACC ATGTCGACCA TGTCTTCGTC
GCCCAGGAGC TGACGCAGGG CGAGGCCGCG CGCGAGGGCG GCGAGGCGGA CATGGCGCTG
TGCTGGCTGT CCTTCGAGCA GGCGCTGGAG CTGGTGTGGT CGGGGCAGAT CCGGCATGCC
GGGAGCGCGT ATGCGCTGAT GTCTTTTAAG CATCTGCGGG AGCTGTAG
 
Protein sequence
MSERSARCAA TGSGVNATDS PAIEVNTVAE IAEAAETTDW RRLDSVVVLA TPWFDVRQDA 
VIRPDGAADV YHHVATPGSV TVLPVAEDGR VLLTRQWIYT HGGVQWRLPA GTIERFDERP
VAAARRELAE ETGLRAARWV ALGAVNGADS LTNHVDHVFV AQELTQGEAA REGGEADMAL
CWLSFEQALE LVWSGQIRHA GSAYALMSFK HLREL