Gene Caci_6685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6685 
Symbol 
ID8338049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7703200 
End bp7704801 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content68% 
IMG OID644959779 
Productcellulose-binding family II 
Protein accessionYP_003117372 
Protein GI256395808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.713256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCA GACAGAGGCT GAGACCGCGG CCAAGACTGC GGGCGGCCCT CGGCGCGACG 
GCCGCCGTGG CGCTCATGGC CGGTTCGGCG ACCGCGGCGG TGCTCGTACC CGGGACCGCG
AGCGCCGCGA CCACCGTGCA GTGTCAGGTC ACGTATACGG TCGCCAACGA CTGGGGTTCC
GGGTTCACCA CGAACATCAC GATAGCCAAC GTCGGCACGA GCGCGTGGAC CGGGTGGACG
CTGGGCTACA GCTATTCCGG CAACCAGACG CTGCAAAGCG GCTGGAACGG AACCTGGTCG
CAGTCGGGCA AGGCGGTGAC GGTCGCCAAC GTCTCCTATA ACGGTTCAGT CGCCGCCGGC
GCCACCACCA GCATCGGAGC CAATTTCACG TACAGCGGCG CGAACACCGC GCCGACCGTG
TTCAGCGTCA ACGGCACTAC GTGCAACGGC GTGGGCTCGC CGTCCTCGCC GACGGGTACG
ACGCCGAGCA CCACTCCCAG CACGACGCCG AGCACTACTC CCAGCACGAC CCCGAGCACC
ACCCCGAGTA CGACGCCCAG CACCACCCCG AGCTCCCCTC CCCCGACGTC CGGCGCCCCG
GCGCTGCACG TCTCGGGCAA CCAGCTCCTG GACAGCACCG GCAAGGTCTT CGTCCCGCAC
GGGGTGAACC GCTCCGGCGC GGAGTTCGCG TGCGTGCAGG GCAAGGGCAT CTTCGACGGT
CCGGTCGACG ACGCCTCGGT GGCGGCGATC GCCTCCTGGA AGGTGAACGT CGTCCGGGTT
CCGCTGAACG AGGACTGCTG GCTCGGTGAG TCCACCGTGC TGCCGCAGTA CGGCGGAGCC
ACGTACCAGG CGGCGATCGA GAGCTTCGTC AGTCTGCTGC ACAAGCACGG CATGGCGGTC
ATCCTGGACC TGCACTGGAC CGACGGCGTC TACACCGGCC AGTCCTCGGC ATGTTCGGTG
GCGACGGCGA CCTGCCAGAA GCCGATGCCC GACGCGGCGA ACGCCCCGGC GTTCTGGGCT
TCGGTGGCCG GGGCGTTCAA GAACGACCAG TCGACCGTCT TCGACCTGTT CAACGAGCCC
TACCCGGACT TCGCCGCGGG CTTCAACGCC GCGCTGGGCT GGTCCTGCTG GCAGAACGGC
GGGACCTGCA CCGGCATCAA CTACCAGGTC GCCGGAATGC AGTCGCTGGT CAACGCGGTG
CGCGGCGCCG GGGCGGGCAA CGTCCTGATG CTCGGCGGCG TGGCGTACTC CAACGACCTG
AGCCAGTGGC TGGCCCACGA GCCGACGGAC CCCTCGCACA ACCTCGTGGC GTCCTGGCAC
TCGTACAACT TCAACTCGTG CTCGTCCTCG TCGTGCTGGG ACTCCCAGGT CGCACCGGTC
ATCGCGCAGG TGCCGGTGAT CCCTGGGGAG ATCGGCGAGA ACGACTGCGG CCACTCCTAC
ATCGACACGC TGATGGCGTG GCTGGACAGC CACCACACCG GCTACGCGGC GTGGACGTGG
AACACCTGGG ACTGCTCCTC GGGTCCCTCG TTGATCAGCG CGTACGACGG AACGCCCACG
AACTACGGCG CCGGATACAA GGCGCACCTG GGCACCTTCT GA
 
Protein sequence
MFARQRLRPR PRLRAALGAT AAVALMAGSA TAAVLVPGTA SAATTVQCQV TYTVANDWGS 
GFTTNITIAN VGTSAWTGWT LGYSYSGNQT LQSGWNGTWS QSGKAVTVAN VSYNGSVAAG
ATTSIGANFT YSGANTAPTV FSVNGTTCNG VGSPSSPTGT TPSTTPSTTP STTPSTTPST
TPSTTPSTTP SSPPPTSGAP ALHVSGNQLL DSTGKVFVPH GVNRSGAEFA CVQGKGIFDG
PVDDASVAAI ASWKVNVVRV PLNEDCWLGE STVLPQYGGA TYQAAIESFV SLLHKHGMAV
ILDLHWTDGV YTGQSSACSV ATATCQKPMP DAANAPAFWA SVAGAFKNDQ STVFDLFNEP
YPDFAAGFNA ALGWSCWQNG GTCTGINYQV AGMQSLVNAV RGAGAGNVLM LGGVAYSNDL
SQWLAHEPTD PSHNLVASWH SYNFNSCSSS SCWDSQVAPV IAQVPVIPGE IGENDCGHSY
IDTLMAWLDS HHTGYAAWTW NTWDCSSGPS LISAYDGTPT NYGAGYKAHL GTF