| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6683 |
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| Symbol | |
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| ID | 8338047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7699889 |
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| End bp | 7701790 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959777 |
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| Product | Cellulose 1,4-beta-cellobiosidase |
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| Protein accession | YP_003117370 |
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| Protein GI | 256395806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.918543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.93944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA GCTCACCCAG CGCCACCGGC AGAGCCAGAC GCCTCACCAG TGCCTTCGTG
GCAGCCGGTG TGACGCTTGG GGTGGCCGGC GGGCTCGCGG CGCTGACCAC GACCAGCTCG
AACGCGGCGA CCGCCGCCGG ATGCACCGCG GTGTACTCCA CGACGTGGGA CTCCGGGAGC
GGCTTCGGCG CGCAGGTGGT CATCACCGAC AACGGTCCGG CGTGGACGAA CTGGACGCTC
AGCTACTCCT ACGCCGGCAA CCAGACGCTG CAGAACGGCT GGAACGGCAC CTGGAACCAG
TCCGGCAAGA CGGTCACCGT CACCAACGCG TCCTATAACG GCGCGGTGGC CTCCGGCGGA
ACCGTGACCC CGGCGGGGAA CTTCGGCTAC TCCGGGACCA ACGCGGCGCC GACGTCGTTC
TCGGTCAACG GGATGACGTG CAGCGGGACC ACTCCGCCGC CGACGACGCC GACGACCACG
CCGTCCACGC CGTCCACGAC GCCGACGACC ACGCCGAGCA CGACCCCGTC CACGACCCCG
TCTACGACGC CCTCCACCAC GCCGTCCACC ACGCCCTCGA CGACCCCGTC GACCGGCGGC
GGCGGAGGCG GGCACGTGGC CAACCCGTTC GTGGGCGCCT CGCAGTACCT GAGCCCGGAC
TACGCCGGCG AGGTCAACGC CCAGGCGGCC GCCGACCAGT CGTCGAACCC GGCTCTGGCA
GCCTCCGAGT CGAAGATGGC CGGCTACGCG ACCGCGGTCT GGATGGACCG GATCGCGGCC
ATCACCGGCA CCGGCGACAG CGTGCACCAC GGTCTGCAGT GGCATCTGGA TCAGGCGCTG
AGCCAGCAGA AGGCGGGGAC TCCGATCACC TTCGAGGTCG TCATCTACGA CCTGCCGGGG
CGCGACTGCG CCGCACTGGC CTCCAACGGC GAGATCCCGG CGACCGCCGC CGGCCTGACC
GAGTACGAGT CGCAGTACAT CGACCCGATC TCGGCGATCC TGGCCGACCC GAAGTACTCC
GGCATCCGGA TCGTCGCGAT CGTCGAACCG GACTCGCTGC CGAACGCGGT GACCAACCAG
AGCAAGTCCG CGTGCGCGAC GGCGACGCCG TTCTACGAGT CCGGGGTCGA ATACGCCCTG
AACAAGCTGC ACGCGATCTC CAACGTCTAC AACTACGTGG ACATCGCGCA CTCGGCGTGG
CTGGGCTGGT CCTCCAACAT GGGTCCGGCG GCGCAGGAGT TCGCCAAGGT GGCCCGGGCC
ACGACGGCCG GGTTCGCCAG CGTCGACGGC TTCATCTCCA ACACGGCCAA CTACACCCCG
ACCACCGAGC CGTTCCTGCC GAACTCGACC CTGCAGGTCG GCGGCAACCC GCTGGACTCG
GCGAAGTTCT ACCAGTACAA CCCGTACTTC GACGAGTACG ACTACGACCA GGCGATGTAC
AGCCAACTGG TCGGCCAGGG CTTCTCGGCC AACATCGGGA TGCTCATCGA CACCTCGCGC
AACGGCTGGG GCGGCCCGAA CCGCCCGACC GCGCTGAACT CCTCGCCGAC GACCGTGGAC
ACCTACGTCG CGGCCAACAA GGTGGACCAG CGCTCCTTCC GCGGTGACTG GTGCAACCAG
AACGGCGCGG GGGTCGGCTC GCGGCCGACG GTACAGCCGT ACGGCGCGTC CAACCACATC
ATCGCCTACG TGTGGATCAA GCCTCCGGGG GAGTCCGACG GCGACTACCC GAGCGCCTCG
CACAGCCACG GCGACCCGCA CTGCGACCCG GCCGGGACCA ACACCGACGG CAACGGCGGG
ACCTACTCGA CCGGGTCGAT CCCCGGCTAC GACGTGCCGG CCGGACAGTG GTTCGCCGCT
GAATTCCAGC AGGAGGTGGA GAACGCCTAT CCCGCGATGT AG
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| Protein sequence | MGQSSPSATG RARRLTSAFV AAGVTLGVAG GLAALTTTSS NAATAAGCTA VYSTTWDSGS
GFGAQVVITD NGPAWTNWTL SYSYAGNQTL QNGWNGTWNQ SGKTVTVTNA SYNGAVASGG
TVTPAGNFGY SGTNAAPTSF SVNGMTCSGT TPPPTTPTTT PSTPSTTPTT TPSTTPSTTP
STTPSTTPST TPSTTPSTGG GGGGHVANPF VGASQYLSPD YAGEVNAQAA ADQSSNPALA
ASESKMAGYA TAVWMDRIAA ITGTGDSVHH GLQWHLDQAL SQQKAGTPIT FEVVIYDLPG
RDCAALASNG EIPATAAGLT EYESQYIDPI SAILADPKYS GIRIVAIVEP DSLPNAVTNQ
SKSACATATP FYESGVEYAL NKLHAISNVY NYVDIAHSAW LGWSSNMGPA AQEFAKVARA
TTAGFASVDG FISNTANYTP TTEPFLPNST LQVGGNPLDS AKFYQYNPYF DEYDYDQAMY
SQLVGQGFSA NIGMLIDTSR NGWGGPNRPT ALNSSPTTVD TYVAANKVDQ RSFRGDWCNQ
NGAGVGSRPT VQPYGASNHI IAYVWIKPPG ESDGDYPSAS HSHGDPHCDP AGTNTDGNGG
TYSTGSIPGY DVPAGQWFAA EFQQEVENAY PAM
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