| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6682 |
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| Symbol | |
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| ID | 8338046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7696971 |
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| End bp | 7699778 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644959776 |
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| Product | cellulose-binding family II |
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| Protein accession | YP_003117369 |
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| Protein GI | 256395805 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.224663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAA GCTGGAAGAA CGCGGTAAGC GCGGTGCTCG GCGCCGTGCT CGCCGTCGCC
GGGCTCGGCG TCGTCAGTGT GTCGTTGAGC GGCAGTACCG CCGCCGCGGC CTCGGCAGCC
TCGGCGGCCT CCGGTTCCGG TTATACGTGG CAGAACGTGC CGATCGTCGG CGGCGGCTTC
GTGCCGGACG TCGTCTTCAA CACCGGCGCG AAGAACGTCG CCTATGCCCG CACCGACATC
GGTGGGATGT ACCGCTGGAA TCAGAGCTCG AGCAGTTGGA CGCCGCTGTT GGACTGGGTC
GGCTTCACCA ACTGGAACGA GCAGGGCGTC GTCTCGGTCG CCGCGGATCC GGTGCAGACC
AACCGCGTCT ACGCGGCGGT CGGGATGTAC ACGAACAGCT GGGACCCGAA CAACGGCGCG
ATCCTGCGCT CCACCGACCA GGGGAGTACG TGGTCTGCGA CGCCGCTGCC GTTCAAGCTC
GGCGGGAACA TGCCGGGGCG CGGAATGGGG GAGCGGCTGA TGGTCGACCC CAACGACGAC
GCCGTGCTGT ACATGGGAAT GCCCAGCGGG CACGGACTGT GGAAGAGCAC TGACTACGGC
GTGACGTGGG CGCAGGTGAC GGCGTTCCCG AACGTCGGCA ACTACGTGCA GGACTCGACC
GACACCACCG GCTACCTCTC GGACAACCAG GGCGTCGCCT GGGTCGCCTT CGACAAGGCC
TCCGGGACGA CCGGAGCCGC CGGCACGCCG ACCAAGACCA TCTTCGTCGG CGTCGCGGAC
GTGCAGAACA CGGTCTACGA GTCGACCAAC GGCGGCGCGA CGTGGAGCCG CGTCGCCGGG
CAGCCGACCG GCTTCCTGGC ACACAAGGGC CTGGTGGATC CGACCGGCGC CTACCTGTAC
ATCACCACCA GCGACAAGGG TGGTCCCTAC GACGGCGCTT CCGGGGACGT GTGGAAGTAC
GCGATCGCCT CCGGGACCTG GACGCAGATC AGCCCGGTCA AGTCCAGCGA CACGTCGAAC
GACTTCTACG GTTACAGCGG GCTGACCATC GACCAGCAGC ACCCGAACAC CATCATGGTC
ACCGGCTACA GCTCGTGGTG GCCGGACACC TTTATCTACC GCTCCACCGA CGGCGGCGCG
ACGTGGACGA ACGCTTGGTC CTACAACGGG TATCCGACCC GCGTCGACAA GTACACGCTG
GACGTCTCCG CCTCGCCGTG GCTGTCGTGG GGCAACTACC CCTCGCCGCC GGAGGAGACG
CCGAAGCTCG GGTGGATGAG CGAGGGGTTG GCGATCGACC CCTTCAACAG CGACCGCATG
ATGTTCGGCA CCGGCGCGAC GCTGTACGGC ACGACGAACC TGACGGCGTG GGACTCCAGC
ACGGCGAAGG TGAAGCTCTC CGTGATGGCG CAAGGGATCG AGGAGACCGC GGTCACCGAC
CTGGTGTCGC CGCCGTCCGG CGCGCCGCTG CTGTCCGCGC TCGGTGATGT GGACGGCTTC
CGGCACACGG ACCTCACCAA GGTCCCGGCG ATGATGTATC AGAGCCCGAA CTGGAGCACG
TCCACGAGTA TCGACTACGC CGAGGCGAAC CCGAACGACG TGGTCCGCGT CGGCAACGGC
AGCTCGACCG TGAACTCGGC GGCGTTCTCC TCGGACGACG GCGCCGACTG GTACGCGGCG
TCGTCGCAGC CCTCGGGCGT CACCGCCGGC GGCACGGTGG CGATGGCGGC CGACGGCAGC
GCGGCGGTGT GGTCGCCGAC CAGTGCCGCG GTCAGCTACA CGACCACGAC CGGGAGTTCG
TGGACTGCTT CGACCGGCAT ACCCGCCGGC GCGCAGGTGC GCAGCGACCG GGTCAACCCG
AAGAAGTTCT ACGGCTTCAA CTACGCCACC GGCACGTTCT ACCTCAGCAC CGACGGCGGC
AAGACCTTCA CCGCCTCCGC TGCCACGAAC CTGCCCTCGG GCACGGGAGG CGCCTACGTC
CACGCAGTCC CCGGCACCGA GGGCGACCTC TGGCTGGCCG GCGGCTCCAC CTCCGGCGCC
TACGGTCTGT GGCACTCCAC GGACTCCGGC GCCACCTGGA CGAAGCTGGC GAACGTCCAG
CAGGCCGACA ACATCGGCTT CGGCGCTCCC GCACCCGGCC GCACGAACAA GGCGCTGTAC
ACGATCGCCG AGATCGGCGG CGTGCGCGGC ATCTTCCGCT CCGACGACGA CGGCAGCACT
TGGACCCGCA TCAACGACGA CCAGCACCAG TGGGGCAACA TCGGCGCCGC GATCACCGGC
GACCCGCGGG TGTACGGACG GGTTTATGTC GGGACCAACG GACGAGGGAT CGTCTACGGG
ACTATGACGG GGACGGGGAG TTCGTCTTCC TCTTCTCCTT CGACGACACC GAGCACCACG
CCGTCCACCA CTCCCTCGAC GACACCCTCG ACGACGCCTT CCACCACCCC GAGCGCGACC
CCGTCCACGA CGCCGTCGTC CAGTGCCCCG GCGGGCACGT GCCACGTGAC CTACACCAAG
GCGAGCGAAT GGGGTGGCGG CTTCACGGCG AACATCACCG TCGCCAACAC CGGCGCGAGC
CCGTGGACCG CCTGGACGGT CGCCTGGACC TATCCCGGCG ACCAGAAGGT GACCAACGGT
TGGAACGCCA CCGTGACCCA GACCGGAGCC AAGGTCAGTG CCACGAACGT GGCCTACAAC
GGTTCTGTGG CCTCGGGATC GTCGGCGTCG TTCGGGTTCC AGGGCACATG GACGTCGAAC
GACACCAGTC CGACAGCGTT CTCGGTGAAC GGCGCGGCCT GTTCGTGA
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| Protein sequence | MRRSWKNAVS AVLGAVLAVA GLGVVSVSLS GSTAAAASAA SAASGSGYTW QNVPIVGGGF
VPDVVFNTGA KNVAYARTDI GGMYRWNQSS SSWTPLLDWV GFTNWNEQGV VSVAADPVQT
NRVYAAVGMY TNSWDPNNGA ILRSTDQGST WSATPLPFKL GGNMPGRGMG ERLMVDPNDD
AVLYMGMPSG HGLWKSTDYG VTWAQVTAFP NVGNYVQDST DTTGYLSDNQ GVAWVAFDKA
SGTTGAAGTP TKTIFVGVAD VQNTVYESTN GGATWSRVAG QPTGFLAHKG LVDPTGAYLY
ITTSDKGGPY DGASGDVWKY AIASGTWTQI SPVKSSDTSN DFYGYSGLTI DQQHPNTIMV
TGYSSWWPDT FIYRSTDGGA TWTNAWSYNG YPTRVDKYTL DVSASPWLSW GNYPSPPEET
PKLGWMSEGL AIDPFNSDRM MFGTGATLYG TTNLTAWDSS TAKVKLSVMA QGIEETAVTD
LVSPPSGAPL LSALGDVDGF RHTDLTKVPA MMYQSPNWST STSIDYAEAN PNDVVRVGNG
SSTVNSAAFS SDDGADWYAA SSQPSGVTAG GTVAMAADGS AAVWSPTSAA VSYTTTTGSS
WTASTGIPAG AQVRSDRVNP KKFYGFNYAT GTFYLSTDGG KTFTASAATN LPSGTGGAYV
HAVPGTEGDL WLAGGSTSGA YGLWHSTDSG ATWTKLANVQ QADNIGFGAP APGRTNKALY
TIAEIGGVRG IFRSDDDGST WTRINDDQHQ WGNIGAAITG DPRVYGRVYV GTNGRGIVYG
TMTGTGSSSS SSPSTTPSTT PSTTPSTTPS TTPSTTPSAT PSTTPSSSAP AGTCHVTYTK
ASEWGGGFTA NITVANTGAS PWTAWTVAWT YPGDQKVTNG WNATVTQTGA KVSATNVAYN
GSVASGSSAS FGFQGTWTSN DTSPTAFSVN GAACS
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