| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6678 |
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| Symbol | |
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| ID | 8338042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7692906 |
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| End bp | 7694477 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959772 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003117365 |
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| Protein GI | 256395801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.519624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCG AGCTCACCAA AGGACGCCGC ACCCTGGTGC TGGCCGTCGT CGCGCTGGCG
CTGATGATGG TCGTCTCCGC GGTCAGCGGA CTGAACGTCG CGCTGCCCGA CCTGTCCGCC
GCCACCGGCG CCTCGCAGAC CCAGGTGATC TGGATCGTGG ACGCCTACAC CCTGGTCTTC
GTCGGCTTCC TGTTGCCGGC CGGAGCGATC GGCGACCGCT ACGGCCGCAA GGGCACGCTG
GTCGCCGGCC TGACTGTCTT CGGCGCCGCC GCGGCCGCCG CGCTGTTCGT CTCCTCGCCG
AGCACGCTCA TCGCGCTGCG CGGGGCGATG GGGTTGGGCG CCGCCGCGGT CATGCCGACC
ACGCTGTCGA TCATCACCAC GTCGTTCCCG CCCGCCGAGC GCGGTCGCGC GGTCGGGGTC
TGGGTCGGCG TGGCCGGCGG CGGCGCGGTG CTCGGACTGC TGGCTTCCGG CACGCTGCTG
GAATTCTTCG CCTGGAACTC GTTCTTCGCC CTGAACGTGG TCCTGGCCGC CGTCGCCCTG
CTCGGCACGC TGCTGGTCAT CCCGACCTCC CGTGACGCCG ACGCCCCGCG CCTGGACCCG
CTCGGCGGGC TGTTCTCGCT GCTGGCGGCG GTGGGCATCG TGTTCGGGAT CGTCGAGGGA
CCCGACCGCG GCTGGGGCGA CGCGCTGACC GTCGCGGGGT TCGTCGTCGG GGCGCTCGCG
CTGGCCGCGT TCGTCGGCTG GGAGCTGCGC CGTGCCGAGC CGCTGCTGGA CGTGCGCCTG
TTCCGGCTCA AGGGGTTCGG CGCCGGCTCC GGCGTGATCA TGATCCAGTT CTTCGGCAGC
TTCGGCCTGT TCTTCATCAT CCTGCAGTAC CTGCAGTACG TCGCGAACCT CTCGCCCTTC
CGCGCCGCGA TCGCGCTGCT GCCGCTGCCG ATGTTCCTGG TCCCCACCGC CCGCAACGCG
CCGAAGGTCG CCGCGAAGCT CGGCGCCAAC CGCGTGCTGC CGCTCGGCCT CGTGCTGAGC
GCTTCGGGAC TGGCCGTGAT GACGACCCTG GGCACGCACC TGGTCTACTG GCACCTGGCC
GTCGGTCTGG CGCTGTTCGG CGCGGGGATG GGACTGGCCG GGACGCCCGC CACCACCGCG
ATCGTCTCCT CGCTCCCGAC CGCCAAGCAG GGCGTGGGCT CGGCGATGAA CGACCTGTCC
CGCGAACTCG GCAGCGCGCT GGGCATCGCG GTGCTTGGCA GCACCCTGAG TGCCACCTAC
CGCTCCCACG TCTCCGCCGC CACGGTCGGA CTGCCTCAGC AGGCTGCGAC CGGTGCGCAG
TCCTCGATCG CCTTCGTGAA GAGCGCTTCC GGCAAGCTCA CGCAGTTCGG TCCGAAGGGT
CAGCACCTGC TGACCTCCGC GCAGAACTCG TTCGTCGACG CGGCGCACGC GGCATTCGTC
ACCGCGATAG TCGTCCTGCT CGCCGGCGCT GTCTTCGCCG CGATCCGCGC GCCGCACAAG
GGCGACACCG CGCCCGCCGA AACCGGCGCC GGAGTCGGAG CCGGAGCCGG GACGCCCGCC
GAGGTCGCGT GA
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| Protein sequence | MTPELTKGRR TLVLAVVALA LMMVVSAVSG LNVALPDLSA ATGASQTQVI WIVDAYTLVF
VGFLLPAGAI GDRYGRKGTL VAGLTVFGAA AAAALFVSSP STLIALRGAM GLGAAAVMPT
TLSIITTSFP PAERGRAVGV WVGVAGGGAV LGLLASGTLL EFFAWNSFFA LNVVLAAVAL
LGTLLVIPTS RDADAPRLDP LGGLFSLLAA VGIVFGIVEG PDRGWGDALT VAGFVVGALA
LAAFVGWELR RAEPLLDVRL FRLKGFGAGS GVIMIQFFGS FGLFFIILQY LQYVANLSPF
RAAIALLPLP MFLVPTARNA PKVAAKLGAN RVLPLGLVLS ASGLAVMTTL GTHLVYWHLA
VGLALFGAGM GLAGTPATTA IVSSLPTAKQ GVGSAMNDLS RELGSALGIA VLGSTLSATY
RSHVSAATVG LPQQAATGAQ SSIAFVKSAS GKLTQFGPKG QHLLTSAQNS FVDAAHAAFV
TAIVVLLAGA VFAAIRAPHK GDTAPAETGA GVGAGAGTPA EVA
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