| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6666 |
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| Symbol | |
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| ID | 8338030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7681023 |
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| End bp | 7682345 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644959760 |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_003117353 |
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| Protein GI | 256395789 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.393983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGCG GCGGCCTGGC CGGCATCGCG GCGGCCGTGG CGCTCCAGGA GTCCGGGATC
GACGTGGAGC TGTACGAGGC GCGCCCGCGT CTCGGCGGCG CCACGCATTC CTTCCAGCGC
GCGAGCTCCG AAGGCGGCCC GGACCTGACC GTCGACAACG GCCAGCACGT GATGCTGCGC
GCCTTCACCG CCTACCGCGG CCTGCTGGAG CGCCTGGGCA CCGCCGACGG CATCGACCTG
CAGGACCGCT TCGACCTGCG GATCCTGACT CCCGACGAGC GGCCCGACTC CCGACTGCGC
CGCACCGCGT TGCCCGGACC GCTGCACCTG CTTCCGGCAC TGGCGAAGTA CTCCCTGCTC
ACCCCGGCCG AGCGGCTGCG CGCCGCCTCG GCCTCGCTGG CGCTGGGCAA GCTGGACCCG
GACGACCCGG AGCTGGACGC GACCAGTCTG GGGGAGTGGC TCGACCGGCA CGGCCAGAAC
GACCGTACCC GCCGCTACCT GTGGGAGCTG TTCGTCACCG CCGCGCTGAA CTGCGGCGTG
GACGAGGCCT CGCTCGGGCT GTCGGCGATG GTGATCCAGA ACGCGCTGCT CGGCCGCGCC
GACGCCGCCG ACATCGGCGT CCCGCGCATC CCGCTGGGGG AGCTGCACGG CCGCGCCGCC
GAGCGGACGC TGCGGGGCGT GCACCTGAAG ACCAAGGTCG AGCAGATCGT CTCCGGGACC
CGGCTGGTCG TCGACGGCTT TCCGGTGGAC GCCGAGGCGG TCATCGTCGC GGTCCCGCAC
CCGGCCGCCG CGGCGCTGGT GCCCCAGGCG GCGTGTCCGG ACCGCGAGCG TTGGGCCGGA
CTGGCGTCCT CGCCGATCGT GGACGTGCAC GTGCTCTACG ACCGGCCGGT GATGGACGTC
CCGTTCGCCG CCGTCGTCGA CTCGCCGGTG CAGTGGGTCT TCGACCGCAC CGGCGCCGCC
GGGCTCGGCC AGACCCACGG GCAGTACGTC AGCAGCGTGG TGTCGGCGGC CGGGCAGTGG
ATCGACGCGC CGGTCGCGCA GATCCGCGAG GCGTTCCTGC CGGCGCTCGC CGAGGTGCTG
CCGCGCAGCC GGCGCGCGGC GGTCTCGGAG TTCTTCGTCA CCCGGGAGCG CCACGCGACC
TTCCGCCAGG CGCCCGGCTC CGCTGCCCTG CGGCCGCCGT CGGCGACCGG CGTACCAGGG
CTTTTCCTCG CCGGCGCGTG GACCGCCACG GGCTGGCCCG ACACCATGGA GGGCGCGGTG
CGCAGCGGAC TGACGGCCGC CCGCCTGTGC CGTCGCCACC TGCAGAAAGG CAACGTCCGA
TGA
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| Protein sequence | MVGGGLAGIA AAVALQESGI DVELYEARPR LGGATHSFQR ASSEGGPDLT VDNGQHVMLR
AFTAYRGLLE RLGTADGIDL QDRFDLRILT PDERPDSRLR RTALPGPLHL LPALAKYSLL
TPAERLRAAS ASLALGKLDP DDPELDATSL GEWLDRHGQN DRTRRYLWEL FVTAALNCGV
DEASLGLSAM VIQNALLGRA DAADIGVPRI PLGELHGRAA ERTLRGVHLK TKVEQIVSGT
RLVVDGFPVD AEAVIVAVPH PAAAALVPQA ACPDRERWAG LASSPIVDVH VLYDRPVMDV
PFAAVVDSPV QWVFDRTGAA GLGQTHGQYV SSVVSAAGQW IDAPVAQIRE AFLPALAEVL
PRSRRAAVSE FFVTRERHAT FRQAPGSAAL RPPSATGVPG LFLAGAWTAT GWPDTMEGAV
RSGLTAARLC RRHLQKGNVR
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