Gene Caci_6643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6643 
Symbol 
ID8338007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7651496 
End bp7652707 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID644959737 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_003117330 
Protein GI256395766 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.863308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.150112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCCGG TGGCGCACCC CGGCGCGTCA AGTGTCGCGG CGGCATCCGA CCGCGACCTG 
TGTGATCTAG TGGGTCTCAT GGCAGGCAAC CAGGCCGTGA TCGCGGTCAG TGACGCGGAC
GTCGAGGAGC TTCGTACCCG GTTGAGGGGT ACGCGTTGGG CTGAGGCTTG GCCGGTCGGC
GGGTGGGAGG CCGGTGCGGA TCCGGCGGAG CTGCGGCGGT TGGTCGCGTA TTGGGCCGAT
GGTTATGACT GGCGGGTTCA TGAGGACGCC ATCAATGCCC TGCCCTCGTG CTTCGTCGAT
CTCGACGGGA CGCCTGTGCA CTACCTGCGG TATGACGGTG AGCGCCCGGA TGCGCTGCCG
ATCGTCCTTA CCAACGGCTG GCCGAGTTCC TTCCTGGAGC TCACCGGGCT TGCGGAGCGG
TTGGCGGCGC CATCGCGATT CGGGGGTAGC GCTGCGGATG CCTTCACCGT GATCGTGCCC
TCGCTGCCGG GGTTTGCTTT CTCGCCGCAG CGGCCGGCGC TCGGTGGTGC GGAGCAGACC
CATGACCTGT GGCATCGGCT GATGCATGAC GAACTCGGCT TCACGCGCTA CGCGGCGCAT
GGTGGCGATT TGGGCGCCGG TGTCAGCTCG CGGCTTGCCG AGACCCACCC CGAGGCGGTG
GTCGGCCTGC ATCTGCTGGC CGTGGCCGCG CCGGCCGACT ACGACCCCGC CGGGCTCAGT
GCGCAGGAGC GCGCCTACCT GGACTCCATC GCGACCTGGC AGGCGCAGGA GGGCGGGTAC
CAGCACCAGC AGAGCACGCG TCCGCTCACC TTGAGCCAGG GCTTGTCCGA CTCGCCCGCG
GGTCTGCTCG CCTGGATCGT CGAGAAGTAC CGCGCGTGGA GTGACTGCGG CGGCGACCTG
TCCTCGCGCT TCACCGATGA TTTCCTGCTG ACCCAGGCAT CGCTCTACTG GTTCACCGGC
ACGATCTCCA CTTCCTTCCG TCCCTACTAC GAGTACGCGC ACGGTCTGAC CCGGCGCGTG
CAGCAGGTCG GCGTTCCCAC GGCGCTCGCC TTGTTCCCCG CCGACCTGAG CCAGCCGCCG
CGCAGTTGGG CCGAGCGCAC GTACCGCGTC ACGCGCTACA CGCAGATGCC GCGGGGCGGC
CATTTCCCCG CCCACGAAGA ACCCGAGCTG CTGGCCCGGG ACATCACCGA GTTCTTCCGC
GCATACCGCT GA
 
Protein sequence
MRPVAHPGAS SVAAASDRDL CDLVGLMAGN QAVIAVSDAD VEELRTRLRG TRWAEAWPVG 
GWEAGADPAE LRRLVAYWAD GYDWRVHEDA INALPSCFVD LDGTPVHYLR YDGERPDALP
IVLTNGWPSS FLELTGLAER LAAPSRFGGS AADAFTVIVP SLPGFAFSPQ RPALGGAEQT
HDLWHRLMHD ELGFTRYAAH GGDLGAGVSS RLAETHPEAV VGLHLLAVAA PADYDPAGLS
AQERAYLDSI ATWQAQEGGY QHQQSTRPLT LSQGLSDSPA GLLAWIVEKY RAWSDCGGDL
SSRFTDDFLL TQASLYWFTG TISTSFRPYY EYAHGLTRRV QQVGVPTALA LFPADLSQPP
RSWAERTYRV TRYTQMPRGG HFPAHEEPEL LARDITEFFR AYR