Gene Caci_6642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6642 
Symbol 
ID8338006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7650941 
End bp7651462 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID644959736 
ProductCurculin domain protein (mannose-binding) lectin 
Protein accessionYP_003117329 
Protein GI256395765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0494552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGAA TCACCACCAG CCGGCCGGCT CGACGCACCG CGCAGATCCT CGGCGCCCTG 
GGCCTGCTGG TCGCCGGGAC CGCGCCCGCC TCGGCCTCCG CCACCGGCGC GGCCGCGCCC
CATGTCGTCA CCGGCTACCC CTGCACCAGC AACTCCTCGG TCAACGTGTC CAACTTCCAG
GTCGCCGATG GTGGGAAGTA CCTCGAACCC GGCCAGAACA TCTGCGTCAA CGGCTATCAG
TTCATCGACC AGCGCGACGG CAATCTCGTG ATCTACAACG CCGCCGACAC CGCGCTGTGG
TCCAGCCACA CGGCGATCGG CTCGCCGACG ACCATGGTCT TCCAGCCCGA CGGCAATTTC
GTGATCTACA ACGGCACCAA GGCCCTGTGG GCGACCGGCA CCTACGGACA CCCCACCGAC
TACGTCTGCT TCCAGACCGA CGGCAACATG GTCGTCTACA CCAACACCAA CAGCGGCCGC
ACGACGTGCA CCGGCTCGTC CCTGTGGGCC AGCCACACGT AA
 
Protein sequence
MTRITTSRPA RRTAQILGAL GLLVAGTAPA SASATGAAAP HVVTGYPCTS NSSVNVSNFQ 
VADGGKYLEP GQNICVNGYQ FIDQRDGNLV IYNAADTALW SSHTAIGSPT TMVFQPDGNF
VIYNGTKALW ATGTYGHPTD YVCFQTDGNM VVYTNTNSGR TTCTGSSLWA SHT