Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6642 |
Symbol | |
ID | 8338006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7650941 |
End bp | 7651462 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959736 |
Product | Curculin domain protein (mannose-binding) lectin |
Protein accession | YP_003117329 |
Protein GI | 256395765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0494552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGCGAA TCACCACCAG CCGGCCGGCT CGACGCACCG CGCAGATCCT CGGCGCCCTG GGCCTGCTGG TCGCCGGGAC CGCGCCCGCC TCGGCCTCCG CCACCGGCGC GGCCGCGCCC CATGTCGTCA CCGGCTACCC CTGCACCAGC AACTCCTCGG TCAACGTGTC CAACTTCCAG GTCGCCGATG GTGGGAAGTA CCTCGAACCC GGCCAGAACA TCTGCGTCAA CGGCTATCAG TTCATCGACC AGCGCGACGG CAATCTCGTG ATCTACAACG CCGCCGACAC CGCGCTGTGG TCCAGCCACA CGGCGATCGG CTCGCCGACG ACCATGGTCT TCCAGCCCGA CGGCAATTTC GTGATCTACA ACGGCACCAA GGCCCTGTGG GCGACCGGCA CCTACGGACA CCCCACCGAC TACGTCTGCT TCCAGACCGA CGGCAACATG GTCGTCTACA CCAACACCAA CAGCGGCCGC ACGACGTGCA CCGGCTCGTC CCTGTGGGCC AGCCACACGT AA
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Protein sequence | MTRITTSRPA RRTAQILGAL GLLVAGTAPA SASATGAAAP HVVTGYPCTS NSSVNVSNFQ VADGGKYLEP GQNICVNGYQ FIDQRDGNLV IYNAADTALW SSHTAIGSPT TMVFQPDGNF VIYNGTKALW ATGTYGHPTD YVCFQTDGNM VVYTNTNSGR TTCTGSSLWA SHT
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