Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6640 |
Symbol | |
ID | 8338004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7647716 |
End bp | 7649899 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959734 |
Product | cellulose-binding family II |
Protein accession | YP_003117327 |
Protein GI | 256395763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3534] Alpha-L-arabinofuranosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0877502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGAC GACAAAGCCG GTTCCCACGC TCCTGGACGG CTGTCGCCGC GGCGGCGCTG TTCGTGGGCT CGGCCGCCGT GCCGCTGGCG GCGAGCGCCG GGCCCGCGAG CGCCGGGCCG GCGGCCGCCG CGGCCTCGAC CGCCACGGTC GGGGTGAACG CCGGCCAGAC GCTCGCCACC GTCCCGTCGA CCGCCATCGG CACCAACGGT TCGGTCTACG ACGCCGCGCT CACCGACGCC GCGGTCCCGG GCTTGCTGAA GAACGCCGGG ACCGGTCTGA TCCGGTTTCC CGGCGGGACG TCCTCGGACA CCTACAACTG GAAGACCAAC ACCGATGTGA AGTCGGGCCT GGCCCAGTCG GTCGACTTCG ACCAGTACGC GACGCTGCTC AGCCAGACCG GCGCCCAGGG CATGGTCACC GTCGACTACG GCACCGGCGA CGCCGCCGGC GCGTCGCAGA GCCCTGCCGA GACCGGCGCG CAGTTCGCCG CGGACTGGGT CCGGTACGCC AACGTGACCC ATCACGACGG CATCAAGTAC TGGGAGATCG GCAACGAGAT CTACGGCAAC GGGACCTATG GCGCCAACTG GGAGCCGGAC GACCACTGCG CGGCCGGCAC GAATCCGACC AACTGCGGAC CGGCGGTCTA CGCCCAGAAC GTCAAGGCCT ACATCGCGGC GATGAAGGCC GTCGACCCGA CGATCGTCGT CGGCGTGGTG CTGACCGCCC CGGGCAACTG GCCCGACGGC GTCACCAACG GCGGAAGCCC GCAGACCTGG AACCAGACGG TCATGTCGGC GCTGAACGGC CAGATCGGCT TCGCCGACGT GCACTGGTAT CCGCAGAACC CGGGCAACGA GAGTGACAGC ACCCTGCTGT CCGCCCCGTC GCAGATCCCG ACGATGGTCT CCACGCTGCG TTCGCAACTG GGCCAGTGGG AGGGCTCCTC GACGGTGCCG ATCATGATCA CCGAGACCAA CTCGGTGAGC TCCAACCCGG GCAAGCAGAT CCTGAGCGTC GTCAACGCGC TGTACCTGAC GCAGGACTAC CTGGGCTGGA TCCAGAACGG CGTCGCCAGC GTCGACTGGT GGCAGATCCA CAACGGCATC GTGACCGGCG GCAACACCAG CTCCTCGCTG TACGGCACCG CCACCTACGG CGACTACGGC ATGCTCTCCG ACGGCAGCTG CGGCCTGGTC AACGGCTCCC GGGTCTGCGA GCCCGCAGCC GACACGCCGT TCCCCGCCTA CTACGGCACG CAGCTGCTGA GCCAGTTCAT CCATCCCGGC GACGCCCTGG TCTCGGCCTC CTCCAGCCAG AGCCTGCTGA AGTCCTACGC GGTCAAGGCC GCCGACGGCT CGCTGCGGGT CCTGCTGGTG AACGACGACC CGGCCACCAG CTACACCGTG GGCCTGAACT ACACCGGCTT CACCCCGGCC TCCGGCGCCC CGTCGGTCGC GACCCTGGCG CCGCCCGGCA CCGGCATCAC CACCGCCGCC TCCGGCTCGG CGTCCTCGCA GACCATCGCG CCCTACAGCG CCGCGGTCGT CACGCTGAAG CCGGGCACCA CGGTCACACC GCCCACCACC CCGGGCACCC CGACCGCCTC GAACGTCACG TCCACCGGGG CGACGCTGAG CTGGAGCGCC TCCACCAGCA GCACCGGCCT GGCCGGATAC GACGTGGTCG CGGTCAACGG CAGCACCGAG ACCGTCGTCG CCTCTCCGAC CACCAACTCG GCGACCCTCA CCGGCCTGAC TCCATCCACC GCCTACACCT TCGCGGTGTA TGCCCGCGAC ACTGCAGGAA ACCGCTCGGC GCGCTCCGGC ACGCTCGCGG TCACCACGAG CGCCGGCTCC ACCGGCGCGT CCTGCAAGGT GACCTACGCG CCGAACGTCT GGGGCGGCGG GCTCACCGCC AACGTGACGG TCGCGAACAC CGGCACGGCG GCCTGGTCCT CCTGGACCGT CGGCTTCGCC TTCCCCGGCG ACGAGAAGGT CACCAACGGC TGGAACGCCA CGGTCACCCA GTCCGGCGCC AACGTCACGG CGACGAACAT GAGCTACAAC GGCACCATCG CCCCGGGAGC CACCACCTCA TTCGGGTTCC AGGGCACGTG GAGCGCCAGC AGCGCCTCGC CGACGGCGTT CACCGTCAAC GGCAGCGCCT GCACCACCGG CTGA
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Protein sequence | MRRRQSRFPR SWTAVAAAAL FVGSAAVPLA ASAGPASAGP AAAAASTATV GVNAGQTLAT VPSTAIGTNG SVYDAALTDA AVPGLLKNAG TGLIRFPGGT SSDTYNWKTN TDVKSGLAQS VDFDQYATLL SQTGAQGMVT VDYGTGDAAG ASQSPAETGA QFAADWVRYA NVTHHDGIKY WEIGNEIYGN GTYGANWEPD DHCAAGTNPT NCGPAVYAQN VKAYIAAMKA VDPTIVVGVV LTAPGNWPDG VTNGGSPQTW NQTVMSALNG QIGFADVHWY PQNPGNESDS TLLSAPSQIP TMVSTLRSQL GQWEGSSTVP IMITETNSVS SNPGKQILSV VNALYLTQDY LGWIQNGVAS VDWWQIHNGI VTGGNTSSSL YGTATYGDYG MLSDGSCGLV NGSRVCEPAA DTPFPAYYGT QLLSQFIHPG DALVSASSSQ SLLKSYAVKA ADGSLRVLLV NDDPATSYTV GLNYTGFTPA SGAPSVATLA PPGTGITTAA SGSASSQTIA PYSAAVVTLK PGTTVTPPTT PGTPTASNVT STGATLSWSA STSSTGLAGY DVVAVNGSTE TVVASPTTNS ATLTGLTPST AYTFAVYARD TAGNRSARSG TLAVTTSAGS TGASCKVTYA PNVWGGGLTA NVTVANTGTA AWSSWTVGFA FPGDEKVTNG WNATVTQSGA NVTATNMSYN GTIAPGATTS FGFQGTWSAS SASPTAFTVN GSACTTG
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