Gene Caci_6632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6632 
Symbol 
ID8337996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7641281 
End bp7641604 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content67% 
IMG OID644959726 
Productanti-sigma-factor antagonist 
Protein accessionYP_003117319 
Protein GI256395755 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0661941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGT TCTCCTACCG GGTCCGCGAG CAGGACCGGG TCAGCGTGGT CGAGGTGTCC 
GGGGACGTGG ACATGTCCGT GGCCGGGCAG CTCAGCGACG TGCTGGAGCC GCTGGTGGCG
GACAGGGACG TGGTCCTGGA CTGCACGGGC GTGACGTTCT TCGACTCCAT GGGCCTGCGG
GTGGCCGTGA ACGCGTTGAA CCAGGCCGCG CAGGCCGGTA CAGCGTTCTC GCTGGTGCCC
TCGCAGACGG TCGCGCGAGT ATTGGAGCTG GCCGGGGTGA CGTCCATCTT CGTCATCCAC
GACAGTGCTC CGACGTCTGC TTAA
 
Protein sequence
MPEFSYRVRE QDRVSVVEVS GDVDMSVAGQ LSDVLEPLVA DRDVVLDCTG VTFFDSMGLR 
VAVNALNQAA QAGTAFSLVP SQTVARVLEL AGVTSIFVIH DSAPTSA