Gene Caci_6611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6611 
Symbol 
ID8337975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7622525 
End bp7623418 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID644959705 
Productprotein of unknown function DUF72 
Protein accessionYP_003117298 
Protein GI256395734 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.480653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGACAGGCAC TGCCGGGTGG GCCGACGCGA GTCTGATTCG AAGCGGTTGG 
TACCCGCCGG GAACGAGGAC CGCGGCGGAT CGGCTGCGCT ATTACGCCAG CCAGTTCCCG
CTCGTCGAGG CCGACGCGCC GTACTACGCG CTGCCGAGTG CCACGACCGT GGCGGGCTGG
ATCGACGCGG CGCCCGACGG TTTCACCATG GATGTCAAGG CGTACTCGCT GTTCACGGGC
CATCGAACGC GCACCGCGAC GCTGCCCGCC GATCTCAGGA CCCGTGTTCG CGGCCCGTGG
CTGACGGCGT CGTCGGCGCC GGCAGGACTC GTCGCAGAAC TCTGGCACCG CTTCCACCAG
ACGTTCACGC CGCTGCTCGA ATCAGGGCAT CTCGGGCTGG TGCTTCTCCA GTTCCCGCCG
CAATGCCGAG CGGACGCCGC CGGGTCGGCG GCGGTCCGGG CCGCGCTGCG CCAATGCGCG
CCGTTCCCGG CAGCCGTCGA GTTCCGGCAC AGCTCCTGGC TGGAACCGGA GCAGCGTGAC
CGGACATGGC AGTTGCTTCG CGCCCACAAC GCTGCCTACG TCTGCGCCGA CATGTCCCAG
TCCCACCCCG GCGCCGTTCC CGCGCTGCTC GCAGCCACCG CGAACAAGGC GGTCATCCGT
CTGCACGGCC ACAGTGCCGC GTGGTCACGA GGCGGAAAGG AAGAGCGCTA CCGCTACGAA
TACTCCGCTT CCGAGCTGAA GGCGTGGGCG GACCGAAGCC GCCGGCTCGG AGAGTCCGTC
GATGAGGTGC ACGTCGTGGT GAACACGTGC TGCGCGGGCA CCGCGCAGCG AGCGGCCGCG
ATTCTGCGCG ACCAGCTCGA TGCGTCGGTC GTCGCTACGC CGGGTTCTGA GTAG
 
Protein sequence
MRILTGTAGW ADASLIRSGW YPPGTRTAAD RLRYYASQFP LVEADAPYYA LPSATTVAGW 
IDAAPDGFTM DVKAYSLFTG HRTRTATLPA DLRTRVRGPW LTASSAPAGL VAELWHRFHQ
TFTPLLESGH LGLVLLQFPP QCRADAAGSA AVRAALRQCA PFPAAVEFRH SSWLEPEQRD
RTWQLLRAHN AAYVCADMSQ SHPGAVPALL AATANKAVIR LHGHSAAWSR GGKEERYRYE
YSASELKAWA DRSRRLGESV DEVHVVVNTC CAGTAQRAAA ILRDQLDASV VATPGSE