Gene Caci_6588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6588 
Symbol 
ID8337952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7598938 
End bp7600056 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID644959682 
Productglutamate--cysteine ligase GCS2 
Protein accessionYP_003117275 
Protein GI256395711 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02050] uncharacterized enzyme 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGT CCGTGGAACA GATCCGGGAC GTGCTGACGC TCGGCCTGGA GGAGGAGTTC 
GTCCTCGTCG ACGGCCGCGA ACCAGTCACG GTCCCCAGGG CCGAAGCCGT CCTGGCGCGG
ATCGGCGGCC GCCTGGATGG GCGAATGCAC CGCGAACTCT TCCAGACCCA GATAGAGACC
AACACGCTGC CCCGCGTGAC GGCGGCTGAG CTGCGCGCGG ACCTCGCCGA AACACGCGGG
GCGGCCATCG AGGCCGCGGC CGGCCTCGAC ACGCGGCTGG TCGCCTCGGG CGCCGGAGTG
CTGTCCCGGC GACCGCTGCC GGTGACGCAG TCGCCGCGTT ATCTGGAGAT AGCCCGCCGT
TTCCCGGACG TGCTGGCCGA GTTCGAGAGC GAGCCCAGCG GCTGCCACAT CCACCTGGGA
ACCCTGGACC GCGACAGGGC CGTGCTGCTG GGCACGCGGC TCCGGCCGTG GATGCCGCTG
CTGCAGTCGC TCGCGGGCAA CTCCCCGTTC GCTGCCGGAC GCGACCGCGG CTGCGCCAGC
TGGCGGTACT TCGAGTTCCA GCACTGGCCC TCCGCCGGTC CGGCTCCGAG CTTGACCGGC
GGCGGGTACG AGCGGGCTGT ACGCCGCCTC ATGGAGTCCG GGACCGTCAT GGACCGCAAG
ATGATCTACT GGTTCACCCG GCCCTCGGAA CGCTGGCCCA CCCTGGAGAT CCGGGTCGCC
GACGTGAACC CGGATCTGAA CGTCCCGGTC TTGCTCGCGC TCCTGGTCCG GGGTCTGGCC
GCGACGATCC TGGCCGCCCT GCAGGCCGAC CAGCCGGTTC CGGGCACCGA CGAACACCGG
CTGATCGAGG ACCACCGCCT GGCGGCCCGG TTCGGCCTGG CCGCCGAGGG ACTGGATCCG
GTGAGCGGCA CGCTCGCGTC GGCCGAGGAG CGAGCGGCCA GTCTGCTGGA ATTCAGCCGG
CCGGGCCTTG AGCCCGGAGG CGATCTGGAG ACCGCTGCCC TCCTGCTCGC CGAGGTGCGG
GCCACCGGCG GCGGAGCCGC GCAGCAGCGG GCCGACTTCC AGGTCCGGGG GTCCTTGTCG
GACGTGGTGG ACGGGCTGGT GAAACGGACT GCTGTGTGA
 
Protein sequence
MASSVEQIRD VLTLGLEEEF VLVDGREPVT VPRAEAVLAR IGGRLDGRMH RELFQTQIET 
NTLPRVTAAE LRADLAETRG AAIEAAAGLD TRLVASGAGV LSRRPLPVTQ SPRYLEIARR
FPDVLAEFES EPSGCHIHLG TLDRDRAVLL GTRLRPWMPL LQSLAGNSPF AAGRDRGCAS
WRYFEFQHWP SAGPAPSLTG GGYERAVRRL MESGTVMDRK MIYWFTRPSE RWPTLEIRVA
DVNPDLNVPV LLALLVRGLA ATILAALQAD QPVPGTDEHR LIEDHRLAAR FGLAAEGLDP
VSGTLASAEE RAASLLEFSR PGLEPGGDLE TAALLLAEVR ATGGGAAQQR ADFQVRGSLS
DVVDGLVKRT AV