Gene Caci_6583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6583 
Symbol 
ID8337947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7592931 
End bp7593839 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID644959677 
Producthypothetical protein 
Protein accessionYP_003117270 
Protein GI256395706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.260944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTGG CCGGCGGCGT CATCGCCCTT GTCGTCGTCG TCATACTCAG CACCGTGTTC 
GGCGCTAAGG ACACCACCAA GTCCGCGTCG AAAGCCTCGT CCACGCCGAG CTCTACCGCG
ACCAGCACGA GAGCCCCGGC GAAACCCAGT TCGACGACTC ACTCTTCCAC CTCGACGCCG
AGCCCGACGA CTCACTCCTC CACCGCGACA GCTCACCCCG CGACCCACCC CTCGTCCACG
ACACCTCACC CCTCACCTCG CCCCTCCTCG ACCTCGAAGC CGCCGGCGAC GACCACGACA
TCCCACGCCG CGACCGCCGC TCCCCCCGTG AAGGCCGCGG GACCGGCGCC CACGATCGCT
CCGATCTCGC TCGCCGGCTC CGGCCAGCAG ACCAGCCGGA AGTTCACCGT CGCAGGCGGA
CTCACCGAGT TCACCTCCTC GTGCGCCGAC TGCGACGCCA ACTTCGCCGT CGAACTCCTC
GACGCCACCG GAAACGAAGT CGACCTGCTC GCCAACACGA TCGGCACCTA CACCGGCACC
ACGGCCGAAG GCCTGCCCGC AGGTGACTAC CTCCTGAACG TCACAGCAGA CGCGGCCTGG
AACATCACCA TCACCCAGCC GCGCGCGGTA TCACCCGTCG CGCTCCCCCA GGCCTACAAC
GGGAAGGGCG ACAAAGTCGT CGGACCGTTC AACGCCGGCG GCCCGTTCAA GGTCGACGGC
ACCAACAGCG GCCAAGCCAA CTTCGCGGTC AAAGTCATCG ACGCCAACGG AGACGACGTC
GACCTCGTGT TCAACGAGAT CGGAGACTTC ACAGGCTCCG ACGTCGCGCA GACGACCTTC
TCATCAGGGC CCTACTACCT GGTGGTCACC AGCGACGGGA CCTGGCGCCT GGCACTGTCG
AACCCTTAA
 
Protein sequence
MWVAGGVIAL VVVVILSTVF GAKDTTKSAS KASSTPSSTA TSTRAPAKPS STTHSSTSTP 
SPTTHSSTAT AHPATHPSST TPHPSPRPSS TSKPPATTTT SHAATAAPPV KAAGPAPTIA
PISLAGSGQQ TSRKFTVAGG LTEFTSSCAD CDANFAVELL DATGNEVDLL ANTIGTYTGT
TAEGLPAGDY LLNVTADAAW NITITQPRAV SPVALPQAYN GKGDKVVGPF NAGGPFKVDG
TNSGQANFAV KVIDANGDDV DLVFNEIGDF TGSDVAQTTF SSGPYYLVVT SDGTWRLALS
NP