| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6582 |
|---|
| Symbol | |
|---|
| ID | 8337946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7589287 |
|---|
| End bp | 7592517 |
|---|
| Gene Length | 3231 bp |
|---|
| Protein Length | 1076 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959676 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117269 |
|---|
| Protein GI | 256395705 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGTAC GCCGGGAACT GGTCGAGCCG GTTCAGGCAC GACTTTTTCA CGTCACCAAG
ACTGGAAGCC TGGCCTCCGT CATGGACCAG GAGGCGTTCG AAGAAGGCGG CCGGCTCGCG
GACGCGCTCA ACGAGCTGCT GACGGCCGGC TATGACGACC TTCAAGCCCG GCACGCGTTG
GGCTACTTGT ACTGGTTCCA GTCTCAGGGG ATGGACGACG AGCCGGGTCG GGCGGCACGC
GCCGCAGCGG TCACCTTGTT CGCACCCTGT TTCCTGACCG GAGCGGGAAT CCTGCCCGAA
CCGCTGCTGC CCGAACTCCT CGAGCGGGCT GTGCCGGACG CGGTGGCGAT GCTCCGACAG
CTCCGGAGCC AGGCGCGCAA AGGCGTGGCA GAACCGCTCA ATCCAGCGCG GCTCGACGAG
GCCACGGTCT TGGCCTGGAC GCAGATCACC ACAGCCACGG CCGGGCGGCC GGCTCACGCC
GCACATCTGC CGAATCTGTG CGGCGCGCTC CAGATCCGCG CCGCGAGAAC CGGCCTGCCG
GAGGACTTGG ACGCGGCGGT CGACGCCGGC CGGCGCTCCG TCACCGCCGC GCCGCCAGGC
CATCCGGTCC ACGCAAACGC CATGTCGAAC CTGTCCGGCG CCTTGCGCGC CCGCTATGAG
CACCAGCGTG ATCCGCAAGA CCTCGACGAG GCCGTCGACG CCGCGCGGCA CGCCGTGGCC
GCGACGCCCG AGCCGGGCCC GGACCGGTCC CGCTTCCTGG CCAACCTCGC GAGCGTCTCG
CACATGCGTT ACCACCGCAC GGCCGACCTG GCGGACCTGA ACGCAGCCGT CGACGCCGCC
CGGGCAGCCA CTGCGGCCAC GGACCCGCGC GCGGCGACCC GCGGGCACCG GTTCGCGACC
CTCAGCGGCG TGCTGCTGGA CCGCTACGAG CTCGGGGGCA TGTCGGCGGA TCTCGACGAG
GCTGTCGACG CCGGGCTGCC GGCCGCAGCC GCGATGCCCG AGGACCATCC GGACCTGCCG
GCTCTGGTGG CCCGAGTCGG CGAGGCAATA CGCAGACAGG CTGAGCGGAC CGGGGATGCC
GAACGGCTCG ACGCTGCCGT CGCTCTGGCC CGGCGGGCGA TCGATCTGAC CCCCGAGACC
GACCAGGCGG CAAAGGCGGC ACGGCGGCTG AACCTCGCCG TGGCCCTCCT GCACCGTGCC
GAGTCCTTCC CAGACCGGCG TGCCGACCTG GACGAGGCGA TCGCCGTCGG CCGGCAGGCG
ACCGCCGATC CGGGGTGGGC CCGAGTGCGA ATCCTGGCTC TCACCAATCT CAGCACCGCG
TTGCGGAGGC GGTTCGAGCG CAGCGCCAAC CGTGCCGACC TCGACGCGGC GGTAGCGGCC
GGCCGCGAAG CGGTGCGGGT CGCAGGGCAC GAGGTCACTG GCGGCTTCGA ACATGCCGTG
GCTCTCACCA ACCTCGGCTC TACACTGGCA GTACGGCTTG AAAAGTCGGC GGAGGCTGGA
GATCTGGCCG AGGCTGTACG CCTCTGCACG CAAGCGGCAC ACATGGCGAC CGCGCCAGCG
CTGCTCCGGA CCAGGGCCGC AGCCACCGGC GGGCGCATGA TCGCCCGCAC TGATCCGGCC
CAAGGTGCCG CGCTGCTGGA GACCGCGGTG GCGCTGCTGC CGCTCCTCGC GCCCCGGCAT
AAGAACCGCG CGGACACGGC GTACGCACTC GGGGAGCTCA CCGGCGTGGC CAACGACGCC
GCTGCCGCGA TACTGGCGGA CGATCAGCCC CGGCCGTCAT CGCCGCAAGC AGCGCGCGCC
CTGGCGATCC TCGAACAAGG CCGCGCCGTC CTCCTCGGCC GCGGCCTTGA CGTCCGCGGC
GATCAGGCCG CACTGGAACG TGAGCATCCC GCGCTGGCCG CCCGCCTCGA CGAGCTGCGC
ATCCTGCTCG ACGGCGAACG CACCGCGCTC CTGGAATCCG ACCCTGACCT GCCCGCACCA
GTCGAGCAGG ACCGGATCTC GCTGACAGCC GACCTGCGAC GGCTGCTAGA CCACATCCGC
TCCCAGGACG GATTCGCCAC CTTCGGCCTG CCCCCGGACC CTACTGCGCT GGCGACTGCG
GGCGCAGAGG GACCGGTCGT GGTCTTCGTC GTCACCTTGA CGAGTGGTCA CGCGCTCCTG
CTGACCGCCG AGGGTATTCG TGCCCTGCCA CTCCCCGGCC TCACGATCCA CTCCGTGCTC
GACCAAGGAC ACACCTTCTA TTCGGCCTTG CAAGGGACTT CGCCGGGTAT GTCCGAAGTC
CTCGAATGGC TTTGGGACAC CGTGGCCGGT CCGGTCCTCG ACGCCCTCGG CATCCACACG
CCGCCCGGCG CCGACGAACC CGCACCCCGC ATTTGGTGGG TGACCGGCGG TGTCCTCGGC
ATGCTGCCGA TCCACGCGGC CGGCTACCAC CGCGAAACCC CGGCCTCGGC CAGGCGCACC
GTCCTGGACC GGACGGCCTC GTCCTACGTC CCGACAGTCC GCGCCCTCCT CCAAGCCCGA
AACCAGCGCG ACCGTGAACG CCGAAGCCGA CAACAGTCCA GCACCCCTGT CCCAGCCCTC
AGTTCTCTGA TCGTCGCGAT GCCCACGACT CCCGGAGCCG AAAAGCTCCC GGGCTCCGCC
GCCGAGGCCG AAGCCCTCAG GCCGCTGCTC CCCGACCCCG CCACACTGAT CGAGCCCGAA
CCAGGCACCG AAGGCGTACC CCCGACGAAG CCGCGAGTCC TCCAGGAACT CACCACGCGG
TCGATAGCCC ACTTCGCCTG CCACGGCCAC CACGACCCCA ACGATCCCGC CGCCGGCCAC
CTCCTCCTCC ACGACCACCG ACAGGACCCC CTGTCCGTGA AAGCCCTGGC CGCACTCGCC
CTCGGCCACG CCAACCTGGC ATACCTCTCC GCCTGCGACA CCGCCCTCGG CCTGTCCCCC
GGCCGCCTCA TCGACGAGTC CCTCCACCTC GCGACCGCCT TCCACCTGGC GGGCTTCCAG
CACGTGATCG GCACTCAGTG GATGGCCAAC GACCTGGTCG CCGTGAACGT TGCCAGCGCC
TTCTATCGAC AGCTGCTCAA TCCCACAGCA GCACCAACCG ACCTCGACCT CAATCTCAAT
CTCAATCTCG ACCGCTGCGC CCACGCCCTC CGCGAAGCCG TCCTGCGCCA GCGGAACCGT
CACGCAGCAC GCCCTCACCT CTGGGCGCCC TATATCCACG TAGGTACGTG A
|
|---|
| Protein sequence | MGVRRELVEP VQARLFHVTK TGSLASVMDQ EAFEEGGRLA DALNELLTAG YDDLQARHAL
GYLYWFQSQG MDDEPGRAAR AAAVTLFAPC FLTGAGILPE PLLPELLERA VPDAVAMLRQ
LRSQARKGVA EPLNPARLDE ATVLAWTQIT TATAGRPAHA AHLPNLCGAL QIRAARTGLP
EDLDAAVDAG RRSVTAAPPG HPVHANAMSN LSGALRARYE HQRDPQDLDE AVDAARHAVA
ATPEPGPDRS RFLANLASVS HMRYHRTADL ADLNAAVDAA RAATAATDPR AATRGHRFAT
LSGVLLDRYE LGGMSADLDE AVDAGLPAAA AMPEDHPDLP ALVARVGEAI RRQAERTGDA
ERLDAAVALA RRAIDLTPET DQAAKAARRL NLAVALLHRA ESFPDRRADL DEAIAVGRQA
TADPGWARVR ILALTNLSTA LRRRFERSAN RADLDAAVAA GREAVRVAGH EVTGGFEHAV
ALTNLGSTLA VRLEKSAEAG DLAEAVRLCT QAAHMATAPA LLRTRAAATG GRMIARTDPA
QGAALLETAV ALLPLLAPRH KNRADTAYAL GELTGVANDA AAAILADDQP RPSSPQAARA
LAILEQGRAV LLGRGLDVRG DQAALEREHP ALAARLDELR ILLDGERTAL LESDPDLPAP
VEQDRISLTA DLRRLLDHIR SQDGFATFGL PPDPTALATA GAEGPVVVFV VTLTSGHALL
LTAEGIRALP LPGLTIHSVL DQGHTFYSAL QGTSPGMSEV LEWLWDTVAG PVLDALGIHT
PPGADEPAPR IWWVTGGVLG MLPIHAAGYH RETPASARRT VLDRTASSYV PTVRALLQAR
NQRDRERRSR QQSSTPVPAL SSLIVAMPTT PGAEKLPGSA AEAEALRPLL PDPATLIEPE
PGTEGVPPTK PRVLQELTTR SIAHFACHGH HDPNDPAAGH LLLHDHRQDP LSVKALAALA
LGHANLAYLS ACDTALGLSP GRLIDESLHL ATAFHLAGFQ HVIGTQWMAN DLVAVNVASA
FYRQLLNPTA APTDLDLNLN LNLDRCAHAL REAVLRQRNR HAARPHLWAP YIHVGT
|
|---|
| |