| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6572 |
|---|
| Symbol | |
|---|
| ID | 8337936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7575172 |
|---|
| End bp | 7576896 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644959666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117259 |
|---|
| Protein GI | 256395695 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3596] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG ACAACTCTTC CACCCTCGCG ATCCTCACCG CGATCTTCCA CGACCAGCCC
GAGCTCCTCC GCGCGGTCAA GCTGGGCGAC CTCCACTCGA GCCAGCTGCT CGAGGAGGTC
CGCACCCAGA ACAAGCTCTT CGGCGGCCCG GTCCGCCAGT TCGCGGTCGG GCGCACGGGA
GCCGGCAAGA CCACGCTCGG GAACCTGCTG TTCGGCGCCG AGGCGATGAA AGTGACCGGC
TACAACGACT GCACCGACTA CATCGGCCGG GTGCGCCTCA AGAGCGATAT GTCCTACTTC
GACACCCCTG GCGCCGGCGG CGACGACGAG TACGAGAACT ACGCCCGCAT GGCCCTGGGC
CTGCCCCAGC TCAGCGTGCC CGAGGTCACC GAGTTCAGGC TGCTGGACTT CACCAACGCC
ACACTCGACG CACGGCAAAG GGTCGAGAAC GTCACCCAGA CCGTGATCAC CGCGGACGAT
TACGAGAAGG GGTTCGCGAA GAAGTATCCG CCCGACGTCC TCATGTATGT GGTGTCCCCG
CACGTGCAGT TCGTGCGCAC GGACCGTGAG TACCTCCAGG ACATGCTCAA GCGGTACGGC
GACCGGGTCG TCATCGCTCT CAACCGGTGG GACGGGATGA CCGCCGAGAA CCACGTGGAG
AACGTGCGCC GGCAGATCGA CACCGTCTAC CGGCACGTGT CCCCTGACGG CTCGCTGCGC
CCGCGGTACG CCGAGTTCAA CGCCCGCACC GGCTCCGGTA TGGACGAGCT GACCCGGCAC
ATCTGCGAGG TCATCGATCC GGCCAAGCTG GGCCGGATGC AGGCGGTGCT CGACGGCAGC
CTGAAGGACC AGGCCCGCAA GGAGCGGGCC CGGCACTACC ACCGCACTTT GGACCGGATC
GCCGCACGCC TGGCCCTGCA CACCGTCGAC CACCAGACCG CCGGGCTGGA CCTGATCACG
CTGGCCGCCG ACGGCGTCGC CCAGTACGGC GTGCTGACCT TCGAGGCCGA GAACGAGGCC
CAGGAGGTCC GCGACGAGTT GGCCCGCCAC GTCGCGGACG AGGCCGAGCG AGTGCGCCGC
GAGCGCACCG AGGACATCGT CACCCAGCAA GTGAAGACGG GCACCCGCGA CATCATCACC
CAAGAGCCGG TCTACGACAT CGAGGAGAAG ATCGAGTACG AGACGCACCG GATCTCGGAG
CAGATCAGCG AGAGCACCGG CGTCGGTTTG TGGAAGTCGA TGGCGATCCA GACGGGCGCC
GCCGTGGACC GCGCCGCCAA CTGGCTGCAG GGCGGCACGC AGAAGGAGCG GGAGGCGATC
AAGCACCAGG CGCGGAAGGA CCAGGTCAAA ATCACCACGC ACATGGTGGA GAAGGACATC
CAGGTCCCGG TCAAACGCTA CGAGCAGAAG ATCGCCAGTT ATCAGGACAA GGTGATCGCC
ACCGTCACCG AGGTGGTCGG CATGACCGAC ACCGTGGTCG GCACCAGGGC CCTGCAGGGC
GCGGTGCCGC TGATCGAACT GCTGCTGTCG ATAGGGCACG GCGTCGAGCG GTTCTGCGTC
GCGACCGGTG AGCGCAAGCC GATCGACGAC TACGTCGCCG CCGCCCGCGA CCAGATCGCC
CTGGAGTTGG ACCGGGTGCG CCGCCAGCTC GACCAGTTGA TCGAGCGCGG CGCCCCGGCC
GAGCAGCAGA TCGCGGATCT GCTCGACTCC CTGTTCGCGA AGTAG
|
|---|
| Protein sequence | MADDNSSTLA ILTAIFHDQP ELLRAVKLGD LHSSQLLEEV RTQNKLFGGP VRQFAVGRTG
AGKTTLGNLL FGAEAMKVTG YNDCTDYIGR VRLKSDMSYF DTPGAGGDDE YENYARMALG
LPQLSVPEVT EFRLLDFTNA TLDARQRVEN VTQTVITADD YEKGFAKKYP PDVLMYVVSP
HVQFVRTDRE YLQDMLKRYG DRVVIALNRW DGMTAENHVE NVRRQIDTVY RHVSPDGSLR
PRYAEFNART GSGMDELTRH ICEVIDPAKL GRMQAVLDGS LKDQARKERA RHYHRTLDRI
AARLALHTVD HQTAGLDLIT LAADGVAQYG VLTFEAENEA QEVRDELARH VADEAERVRR
ERTEDIVTQQ VKTGTRDIIT QEPVYDIEEK IEYETHRISE QISESTGVGL WKSMAIQTGA
AVDRAANWLQ GGTQKEREAI KHQARKDQVK ITTHMVEKDI QVPVKRYEQK IASYQDKVIA
TVTEVVGMTD TVVGTRALQG AVPLIELLLS IGHGVERFCV ATGERKPIDD YVAAARDQIA
LELDRVRRQL DQLIERGAPA EQQIADLLDS LFAK
|
|---|
| |